Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq24 123 2e-23 seq10 93.3 3e-14 seq26 91.5 1e-13 seq27 82.4 6e-11 >seq24 Length=1624245 Score = 123 bits (136), Expect = 2e-23 Identities = 280/408 (69%), Gaps = 15/408 (4%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261 || ||||| || || |||||||| |||| || || | | | ||| | ||| |||| | | Sbjct 363065 GGGGGGTTCTTAAGGATGAAGGTCGTGAGTTTGTG-GCGCA-TGTCGACGTTGCCGCGCT 363122 Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATG--TTCTTTTTAGCGGACACGATGAGCTC 34319 |||||||| |||||| | || || ||| ||| | || | || |||||| || Sbjct 363123 TGCCGCATGCCTTGCAGTC---ACGGAGGATGAATTCGTCTTTGGTGAT--GATGAGTTC 363177 Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 || || ||||| | || || || | ||| |||||| |||||| | || |||| Sbjct 363178 CGTTTCGGGGTTTTTGCACGACGCGCATAGCACGAACTTGTCGATGAAGACGTCGAGCAA 363237 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 ||| | | | | ||||| | ||||||||||||| | |||||| | | | || Sbjct 363238 GTCACGCAGACGATTCGTCTCGTGCGCGCCGTTGACGATGTAGCGTTCGGTCTCATCATT 363297 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499 || || ||| ||||| || |||||||| ||| |||| |||||||| | ||| || Sbjct 363298 GAAGGTCGCTTGGGCGCCGAGTTCGCACCCAAAGAACTTGGTCGGGTAGGACGACGGGCG 363357 Query 34500 -TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | |||| || |||| || | ||||||| | |||||||||||||||||||| Sbjct 363358 ATTCAAG-GCTCGCGCGACATCAGCCATGTTGGGAAACACAGTCTTGATGCCGTTGCCGC 363416 Query 34559 TTCCTTCGACCTTGGCGCAGATGCG-CGGCATTTTGTAGCGGTAGAAC 34605 || |||| |||| ||| ||| ||||| ||||||||||||||| Sbjct 363417 GGCCCTCGATTTTGGTCAAGA-GCGAGGGCATCTTGTAGCGGTAGAAC 363463 >seq10 Length=1588530 Score = 93.3 bits (102), Expect = 3e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 110274 TGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACG 110333 ||||||| || ||||| || | || ||||| ||||| ||| |||| ||| | || Sbjct 1351188 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1351129 Query 110334 ATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAAC 110393 | || ||| | | || || ||||| ||||| |||||| | ||| || || | Sbjct 1351128 ACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGC 1351069 Query 110394 AAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACA 110453 || | || || | ||| || || ||||| ||||||| | | || | || |||||||||| Sbjct 1351068 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACA 1351009 Query 110454 TTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 | ||||| || || ||| | ||| ||||| | | ||||| || || Sbjct 1351008 TCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGG 1350963 >seq26 Length=1828681 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| || || |||||||| ||||| || |||| ||| || Sbjct 1063356 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCTTCA 1063297 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || || |||||| ||||| || ||| | ||| || ||| Sbjct 1063296 GACACGATTGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAA 1063237 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | |||||| || || || ||||||| | | || | || ||||||||| Sbjct 1063236 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGTACGCTCGCAGATTACAAC 1063177 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || || || || | ||| ||||| Sbjct 1063176 ATCCAGAAGGAGTCGACCCTCCACTTGGTG 1063147 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| || || |||||||| || || || |||| ||| | Sbjct 1303354 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1303295 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || || |||||| ||||| || ||| | ||| || ||| Sbjct 1303294 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1303235 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | |||||| || || || ||||||| | | || | || || |||||| Sbjct 1303234 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1303175 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 |||||||| || || || | ||| ||||||| Sbjct 1303174 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTT 1303143 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| || || |||||||| || || || |||| ||| | Sbjct 1303582 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1303523 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || || |||||| ||||| || ||| | ||| || ||| Sbjct 1303522 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1303463 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | |||||| || || || ||||||| | | || | || || |||||| Sbjct 1303462 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1303403 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 |||||||| || || || | ||| ||||||| Sbjct 1303402 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTT 1303371 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||| || || |||||||| || || || |||| ||| | Sbjct 1304038 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1303979 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || || |||||| ||||| || ||| | ||| || ||| Sbjct 1303978 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAA 1303919 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | |||||| || || || ||||||| | | || | || || |||||| Sbjct 1303918 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1303859 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 |||||||| || || || | ||| ||||||| Sbjct 1303858 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTT 1303827 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| || || |||||||| || || || |||| ||| | Sbjct 1305406 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 1305347 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || || ||||| ||||| || ||| | ||| || ||| Sbjct 1305346 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAA 1305287 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | |||||| || || || ||||||| | | || | || || |||||| Sbjct 1305286 CAACGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAAC 1305227 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTT 110484 |||||||| || || || | ||| ||||||| Sbjct 1305226 ATTCAAAAGGAGTCGACCCTCCACTTGGTGTT 1305195 >seq27 Length=880931 Score = 82.4 bits (90), Expect = 6e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 110275 GCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGA 110334 |||||| || ||||| ||| | || ||||| || || ||| |||| ||| | ||| Sbjct 149964 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 150023 Query 110335 TACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACA 110394 || ||| | | || || ||||| ||||| |||||| | ||| || || || Sbjct 150024 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCA 150083 Query 110395 AAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACAT 110454 | | || || | ||| || || ||||| ||||||| | | || | || ||||||||||| Sbjct 150084 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACAT 150143 Query 110455 TCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || | ||| |||| | | || ||||| || Sbjct 150144 CCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGTCTCCGAGGTGG 150188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841413834241