Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq27 87.8 1e-12 seq10 86.0 4e-12 >seq27 Length=880931 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | ||| | ||||| || || || ||| ||||| ||||||||||||| Sbjct 150189 ACCACCTCGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGC 150130 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | || || |||||||| || | ||| ||||| ||| | || Sbjct 150129 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGG 150070 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || || | || | ||| | |||||| || || | Sbjct 150069 GATGCCTTCCTTGTCTTGGATCTT-GGTCTTGACGTTGTCGATCGTGTCGGACGACTCGA 150011 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGC 33747 | || | |||||||| || || || | || || || ||||| ||| Sbjct 150010 CCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 149964 >seq10 Length=1588530 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || || | |||||| || || || ||| ||||| ||||||||||||| Sbjct 1350961 CACCACCACGCAGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCGG 1351020 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 ||| ||||| | || || | || || |||||||| || | ||| ||||| ||| | | Sbjct 1351021 CGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGG 1351080 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| || || || | || | ||| | |||||| || || Sbjct 1351081 GGATGCCTTCCTTGTCTTGGATCTT-GGTCTTGACGTTGTCGATCGTGTCGGACGACTCG 1351139 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCA 33748 || || | ||||| || || || || | || || || ||||| |||| Sbjct 1351140 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 1351188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703851775040