Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq26 86.0 6e-12 >seq26 Length=1828681 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| |||||||||||||||||| | || || | Sbjct 1303140 CGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCA 1303199 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || ||||| || || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1303200 TCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1303259 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1303260 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1303319 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1303320 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303354 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| |||||||||||||||||| | || || | Sbjct 1303368 CGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCA 1303427 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || ||||| || || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1303428 TCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1303487 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1303488 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1303547 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1303548 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303582 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| |||||||||||||||||| | || || | Sbjct 1303824 CGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCA 1303883 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || ||||| || || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1303884 TCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1303943 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1303944 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1304003 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1304004 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304038 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 148255 TCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCG 148314 |||||||||| ||||| ||||| | |||||||||||||||||||| || ||||||||| Sbjct 21008 TCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGGTCGTTCG 20949 Query 148315 GCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTAC 148374 || || | || ||| || | ||| ||||| || ||| | |||||||| Sbjct 20948 GCGACCTTGCCGTCGATGCGAAGCAAATACGAGCGCTCGAGCGTCTTGAAGCCAAAGTAG 20889 Query 148375 TTGTAATCAAAATCTAGCTCGTA 148397 ||||| | ||||| | ||||| Sbjct 20888 TTGTAGCCGAAATCGCGATCGTA 20866 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||| | || || | Sbjct 1302912 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1302971 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1302972 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1303031 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1303032 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1303091 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1303092 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303126 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||| | || || | Sbjct 1303596 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1303655 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1303656 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1303715 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1303716 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1303775 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1303776 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303810 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||| | || || | Sbjct 1304052 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1304111 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1304112 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1304171 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1304172 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1304231 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1304232 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304266 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||| | || || | Sbjct 1304280 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1304339 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1304340 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1304399 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1304400 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1304459 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1304460 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304494 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||| | || || | Sbjct 1304508 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1304567 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1304568 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1304627 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1304628 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1304687 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1304688 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304722 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||| | || || | Sbjct 1304736 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1304795 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1304796 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1304855 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1304856 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1304915 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1304916 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304950 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||| | || || | Sbjct 1304964 CGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCA 1305023 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| || || | | |||| ||||| ||||| ||||| || ||||| || || Sbjct 1305024 TCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 1305083 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | || || | | ||| || |||| ||| | | Sbjct 1305084 TCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATC 1305143 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| || || | ||| || ||||| Sbjct 1305144 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1305178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610979567320