Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq26 125 6e-24 seq10 105 6e-18 seq27 104 2e-17 >seq26 Length=1828681 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||| || |||||||| ||||| Sbjct 1063586 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1063645 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| |||||||| ||||| ||||||||||| | ||| Sbjct 1063646 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGGGGA 1063705 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| |||||| ||| | |||| | | |||||| ||| || || Sbjct 1063706 ATACCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGACGACTCGAC 1063764 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||||||| || || ||||| || || || || || ||||| Sbjct 1063765 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1063812 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||| || |||||||| ||||| Sbjct 1063814 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1063873 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| |||||||| ||||| ||||||||||| | ||| Sbjct 1063874 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCTGGGGGA 1063933 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| |||||| ||| | |||| | | |||||| ||| || || Sbjct 1063934 ATACCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGACGACTCGAC 1063992 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||||||| || || ||||| || || || || || ||||| Sbjct 1063993 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1064040 Score = 122 bits (134), Expect = 8e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||||||||| || | || |||||||||||||||||| ||||| | || || | || Sbjct 1305194 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1305253 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || || ||||| |||||||| || | || || ||||| | |||| || ||||||||| Sbjct 1305254 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1305313 Query 35644 CATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCG 35702 | |||||| ||| | |||| | | |||||| || || ||||| | |||||||| Sbjct 1305314 CTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCG 1305372 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || ||||| || || ||||| || ||||| Sbjct 1305373 TCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1305406 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||||||||| || | || |||||||||||||||||| ||||| | || || | || Sbjct 1303142 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1303201 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || || ||||| |||||||| || | || || ||||| | |||| || ||||||||| Sbjct 1303202 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1303261 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | ||||| ||| | | | | | |||||| || || ||||| | ||||||||| Sbjct 1303262 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1303321 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || ||||| || || || || || ||||| Sbjct 1303322 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303354 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||||||||| || | || |||||||||||||||||| ||||| | || || | || Sbjct 1303370 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1303429 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || || ||||| |||||||| || | || || ||||| | |||| || ||||||||| Sbjct 1303430 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1303489 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | ||||| ||| | | | | | |||||| || || ||||| | ||||||||| Sbjct 1303490 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1303549 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || ||||| || || || || || ||||| Sbjct 1303550 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1303582 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||||||||| || | || |||||||||||||||||| ||||| | || || | || Sbjct 1303826 CAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCGAGCGTGCGGCCATC 1303885 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || || ||||| |||||||| || | || || ||||| | |||| || ||||||||| Sbjct 1303886 CTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTC 1303945 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | ||||| ||| | | | | | |||||| || || ||||| | ||||||||| Sbjct 1303946 CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 1304005 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || ||||| || || || || || ||||| Sbjct 1304006 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1304038 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || ||||||||||||||||||||| || | || || | || || Sbjct 1305425 CACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCCGCGAGCGTACGGCCATCCTC 1305484 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || ||||| |||||||| || | || || ||||| | |||| || |||||||||| Sbjct 1305485 GAGTTGCTTGCCCGCAAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 1305544 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||| ||| || | |||| | | |||||| || || ||||| | ||||||||| | Sbjct 1305545 GAT-TTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 1305603 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || ||||| || ||||| Sbjct 1305604 TGCCGGTCAGGGTCTTGACAAAGATTTGCAT 1305634 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || ||| || || |||||||| ||||| Sbjct 1062902 CCACCACGGAGACGGAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCG 1062961 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| ||||||||||| | ||| Sbjct 1062962 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 1063021 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| |||||| ||| | |||| | | |||||| || || || Sbjct 1063022 ATACCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGAAGACTCGAC 1063080 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || ||||||| || || ||||| || ||||| Sbjct 1063081 CTCGAGGGTGATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1063128 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||| || ||||||||||| || Sbjct 1063358 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCG 1063417 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || || ||||| |||||||| || | || || ||||| | ||| Sbjct 1063418 AGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1063477 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| ||||| ||| | |||| | | |||||| ||| || || Sbjct 1063478 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGAC 1063536 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||||||| || || ||||| || || || || || ||||| Sbjct 1063537 CTCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1063584 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | ||||||||| || | || |||||| || ||||||||||| || Sbjct 1064042 CCACCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCG 1064101 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || || ||||| |||||||| || | || || ||||| | ||| Sbjct 1064102 AGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1064161 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| |||||| ||| | |||| | | |||||| || || || Sbjct 1064162 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGAAGACTCGAC 1064220 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || || |||| || || ||||| |||||||| Sbjct 1064221 CTCGAGTGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 1064268 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||| || ||||||||||| || Sbjct 1063130 CCACCACGGAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCG 1063189 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || || ||||| |||||||| || | || || ||||| | ||| Sbjct 1063190 AGCGTACGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1063249 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| ||||| ||| | |||| | | |||||| || || || Sbjct 1063250 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCAATCGTGTCTGAAGACTCGAC 1063308 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | |||||| || || || ||||| || || ||||| || ||||| Sbjct 1063309 CTCGAGCGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1063356 >seq10 Length=1588530 Score = 105 bits (116), Expect = 6e-18 Identities = 161/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | ||| ||||||||| |||||||||||||| Sbjct 1350963 CCACCACGCAGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCG 1351022 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || ||||| || | || |||||||| | || Sbjct 1351023 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGG 1351082 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||| |||||| ||| | |||| | | ||||||| ||| || || Sbjct 1351083 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGAC 1351141 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 ||| | ||||| || || ||||| | || || || || || |||| Sbjct 1351142 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 1351188 >seq27 Length=880931 Score = 104 bits (114), Expect = 2e-17 Identities = 139/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||||||||| | || || | || || |||||||| || ||||| Sbjct 150153 CTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 150094 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | || | || |||||||| |||||| ||| | || Sbjct 150093 GATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGT 150035 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| ||| || ||||| | |||||||| || ||||| | ||| || | Sbjct 150034 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 149975 Query 35724 CAAATATCTGC 35734 | || || ||| Sbjct 149974 CGAAGATTTGC 149964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793391507960