Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq26 100 2e-16 >seq26 Length=1828681 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || |||||||| ||||||||| Sbjct 1305180 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1305239 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || ||||| || || || || | |||||||| ||||| || || || Sbjct 1305240 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1305299 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| || | | | || | ||||| | || || || Sbjct 1305300 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 1305359 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || ||||||||||||||| Sbjct 1305360 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 1305407 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 27015 TTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTA 27073 |||||| || || || | || | ||||| || | || || ||||| || || ||||| Sbjct 1062895 TTATTGACCACCACGGAGACGGAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTA 1062954 Query 27074 GTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATC 27133 |||| | |||| | || |||||||| || || ||| | || | ||||| || || Sbjct 1062955 GTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTC 1063014 Query 27134 CGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGC 27193 || || | |||||| || || ||||||| | || | | | || | ||||| | | Sbjct 1063015 TGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGA 1063074 Query 27194 TTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || || | ||||||||||| || || ||||||||||||||| Sbjct 1063075 CTCGACCTCGAGGGTGATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCATA 1063129 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || |||||||| ||||||||| Sbjct 1303128 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1303187 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || ||||| || || || || | |||||||| ||||| || || || Sbjct 1303188 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303247 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1303248 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303307 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1303308 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1303355 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || |||||||| ||||||||| Sbjct 1303356 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1303415 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || ||||| || || || || | |||||||| ||||| || || || Sbjct 1303416 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303475 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1303476 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303535 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1303536 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1303583 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || |||||||| ||||||||| Sbjct 1303812 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCG 1303871 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || ||||| || || || || | |||||||| ||||| || || || Sbjct 1303872 AGCGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303931 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1303932 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303991 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1303992 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1304039 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1302900 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1302959 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1302960 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303019 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1303020 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303079 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1303080 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1303127 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1303584 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1303643 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1303644 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1303703 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1303704 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1303763 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1303764 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1303811 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1304040 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1304099 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1304100 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1304159 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1304160 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1304219 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1304220 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1304267 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1304268 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1304327 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1304328 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1304387 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1304388 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1304447 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1304448 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1304495 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1304496 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1304555 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1304556 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1304615 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1304616 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1304675 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1304676 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1304723 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1304724 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1304783 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1304784 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1304843 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1304844 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1304903 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1304904 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1304951 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| ||||| || | || || || || || || ||||||||| Sbjct 1304952 CCGCCGCGGAGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1305011 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || || | |||||||| ||||| || || || Sbjct 1305012 AGCGTGCGGCCATCCTCGAGCTGCTTTCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 1305071 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | ||||| | || || || Sbjct 1305072 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 1305131 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| |||| || || || |||||||||||| Sbjct 1305132 TCGAGCGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1305179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934208381144