Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq26 336 2e-87
seq10 129 6e-25
seq36 98.7 1e-15
>seq26
Length=1828681
Score = 336 bits (372), Expect = 2e-87
Identities = 535/765 (70%), Gaps = 2/765 (0%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
|||||||||||||| | || ||||||||| ||||| | ||| ||| || |||||
Sbjct 20969 TCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACA 21028
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| | |||||||| |||||| |||| || || |||||||| || |||
Sbjct 21029 ACCTCATGTCGGAGCGCTACTTTACCCACGCCTCGCCGACACTCTTCAACGCCGGAACGC 21088
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|||||| ||| | ||| ||||||||||| ||||||||||||| |||||||| ||||
Sbjct 21089 CTCACCCGCAGCTTTCGTCGTGCTTCCTGGTCACGATGAAGGATGATTCGATCGAAGGCA 21148
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| ||||||||| ||| || | |||||||||| | |||||||||||| |
Sbjct 21149 TCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGA 21208
Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
| | ||| |||| |||| |||| | ||| || ||||||||| | | | |
Sbjct 21209 GCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTACTCGAACG 21268
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| ||||| || |||||||| |||| |||||| || || || |||||| |||| |||||
Sbjct 21269 GCATCGTCCCCATGCTCCGTGTCTACAACAATACCGCGCGCTACGTCGACCAAGGTGGCA 21328
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||||| || | ||||| |||||||||||||| |||||||||||| | | ||||
Sbjct 21329 ACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCTTGGCACGCCGACGTCTTTGAGT 21388
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672
| || || || || ||| || || | || || | ||| ||||| || || |
Sbjct 21389 TCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTTG 21448
Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732
| || ||||| || || ||||||||| | || ||| | || || ||| ||||
Sbjct 21449 CGCTCTGGATCCCCGATCTCTTCATGGAGCGAGTCGAGGCCGCCGGCGACTGGCCCCTGT 21508
Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGT 53792
| ||||| ||| |||||||||||| | || || || || ||||| || |||
Sbjct 21509 TCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTTTATGGCGAAGAGTTCCGCGCCCTGT 21568
Query 53793 ATCG-GACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGG 53851
||| || |||| | |||||||| |||||||| | || |||| || | |||
Sbjct 21569 -TCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGG 21627
Query 53852 GATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCG 53911
| || || ||| || |||||| || || || | |||| |||| ||||||||| |
Sbjct 21628 TACGCGATTCTCGAGGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCC 21687
Query 53912 GTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956
| ||| |||| ||||| |||||| | ||| ||||| |||
Sbjct 21688 GCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCG 21732
Score = 100 bits (110), Expect = 3e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785
|||||||| || ||| ||| || |||||| | | || |||| | |||||| ||
Sbjct 22698 TCTCAAGGCCATCTACAAGACCGTTTGGGAGCTCTCGCAAAAGACCATCATTGACTTGTC 22757
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
|| || || ||||| | |||||||||||| || || || |||||| | || || ||
Sbjct 22758 CGCCGACCGAGGTGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCC 22817
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| |||| | | | ||||||||||| ||||| |||||| ||||| || |||||
Sbjct 22818 GACGATGGCGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAAACGGG 22877
Query 55906 TATGTACTATCTGCGGACCCGCGCC 55930
|||||||| |||| || || |||
Sbjct 22878 CATGTACTACTTGCGCACACGGGCC 22902
>seq10
Length=1588530
Score = 129 bits (142), Expect = 6e-25
Identities = 276/407 (68%), Gaps = 8/407 (2%)
Strand=Plus/Minus
Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933
|||| || || || ||||| | || ||||||||| ||| || | || ||| |||
Sbjct 565617 ATCCCGTTCCAATACCCTCCGAGCCATTGACCAGAGCCATGGGGATGATGGGGATGTACC 565558
Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993
| |||||| | |||||| ||||| | | ||||| | ||| | ||||| |
Sbjct 565557 AAGACGGCTCGATGCTTTGACCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGG 565498
Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACG--CGTGAAGATGTATCGGGAGCTG-- 152049
||| ||| | | || || || ||| | | ||| ||| |||||||| || ||| |
Sbjct 565497 GATGGAAAACGCTACGCGTGAT-GGA-TGACACGTTCGTAAAGATGTAACG--AGCCGAA 565442
Query 152050 GCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTG 152109
||||| || || |||||| || ||||| ||||| || || || ||||| | ||||
Sbjct 565441 GCCGCGTCTTTACCACCTTGCAAACGCGTACCAAATTGACCGTTCGGGTCGAGAATGTTG 565382
Query 152110 AGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCT 152169
|||||||||| || || || | || |||| | | || ||||| |||| |||| |
Sbjct 565381 AGGTTGTTGGACCCTACAAACTGTTGCGCCAGACCGATGATGGTGCCTTGCAAACTCATT 565322
Query 152170 TCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATG 152229
|||||||| || ||||||| ||||| |||| ||| || |||| || | ||||| ||
Sbjct 565321 TCACCGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATC 565262
Query 152230 TCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTG 152276
|| ||||| || ||||| || || | | |||||||| ||
Sbjct 565261 TCTTGCGTCAATTTGCGCTTGAAGCAACCGAACAAGACCTTGCGTTG 565215
Score = 86.0 bits (94), Expect = 7e-12
Identities = 87/111 (78%), Gaps = 2/111 (2%)
Strand=Plus/Minus
Query 119083 GTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTT 119142
|||||| | |||||| ||||| ||||||| ||||||||| || || |||||||||||
Sbjct 563444 GTTGGCCAACTTGGCTCCGTAACCGTTCCTACCACCGGTGACCTTCTCCTCCTCGTCGTC 563385
Query 119143 GTAGTTGGAGCTGGTCAAAAG-GTGCCCAAAGATGAGCTCGGGGATCCAAA 119192
|||||||| ||| | || ||| |||||||| | || ||||||||||
Sbjct 563384 ATAGTTGGAAGAGGTGAGCAGAGTG-CCAAAGATCATTTCCGGGATCCAAA 563335
>seq36
Length=474693
Score = 98.7 bits (108), Expect = 1e-15
Identities = 221/329 (67%), Gaps = 5/329 (2%)
Strand=Plus/Minus
Query 158958 GTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGTTGGAGCATGAGCCA 159017
||| ||||| || ||||| | |||||||| || || | || || ||||| | |||
Sbjct 62097 GTGGGTCTCACCCGTCGCGAGGACAAAGTCGTCGGGGGTGTCTTGCTGCAGCATCATCCA 62038
Query 159018 CATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCATCCATGTTCCCGAG 159077
||| ||||||||||||| ||||||| ||||| || |||||||| |||| ||| |||||
Sbjct 62037 CATACCCTCGACGTAATCGCGCGCGTGTCCCCAATCACGCTTGGCCTCCAAGTTGCCGAG 61978
Query 159078 CTCGATG-ACTTTTCCAGACTTTTTCCA---CTCAGCCAGACCGAGCGTGATCTTGCGCG 159133
| || | | | | ||| | | ||| || | | | | | ||||| | ||
Sbjct 61977 GTAGAGGCAGTCCTGTTGAC-CGAGCGAGATCTCGGCGACAGCTCGGGAAATCTTCCTCG 61919
Query 159134 TCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAACAGAATGCCGGTACAAGCGA 159193
||||||| || || || ||||| ||||| |||| || ||| | || |||
Sbjct 61918 TCACAAAGGTACGACCACGACGCGGGGACTCGTGGTTGAACAAGATACCGTTGCACGCGT 61859
Query 159194 ACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTATCCAAAGAGCTTGGAGACGC 159253
||| || || ||||||||||| || || |||||| | | | | ||||| ||| |
Sbjct 61858 ACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAACTTGGCGACTC 61799
Query 159254 CGTATGGACTCCGAGGATAAAATGGTGTC 159282
|||| || ||||| || || || |||
Sbjct 61798 CGTAAGGTGAACGAGGGTAGAAGGGCGTC 61770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215746912600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |