Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq33 132 4e-26 >seq33 Length=986392 Score = 132 bits (146), Expect = 4e-26 Identities = 194/273 (71%), Gaps = 6/273 (2%) Strand=Plus/Plus Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG---TACTCTGCTCC 30243 || |||||| |||||| |||| ||| || || | | |||| |||||||| || Sbjct 223974 CAACTGATCGACCCCCTCCCCCTGGTAATCATCCTT---GGCCGTTCTATACTCTGCGCC 224030 Query 30244 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30303 || ||||||||||||||||| || ||||| |||| || ||||||| ||| ||| | || Sbjct 224031 AAAGTGCCTCCACTGGAACCCATAAACCGGACCCAAATCCCCCTCTTGCCTATGCCCCAA 224090 Query 30304 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30363 || |||||||| || | ||| || || || | ||||| ||||| ||||||||||| Sbjct 224091 CCCGGCCTTGTCCAGGAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTCTC 224150 Query 30364 AGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30423 || | ||| || | || || |||| |||||||| || || ||||| | || | Sbjct 224151 GGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGATACC 224210 Query 30424 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||||||| |||| || || | |||||| Sbjct 224211 TCGCGTAAAGACCTTCTTTGTGGTCAAGAGGGG 224243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310216779404