Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12-
23] 37 sequences; 25,667,824 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq33 138 8e-28
>seq33
Length=986392
Score = 138 bits (152), Expect = 8e-28
Identities = 196/273 (72%), Gaps = 6/273 (2%)
Strand=Plus/Plus
Query 27453 CAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG---TACTCTGCTCC 27509
|| |||||| |||||| |||| ||| || | ||| || |||| |||||||| ||
Sbjct 223974 CAACTGATCGACCCCCTCCCCCTGGTAATC-ATCCT--TGGCCGTTCTATACTCTGCGCC 224030
Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569
|| |||||||| |||||||| || ||||| |||| || ||||||| ||| ||| | ||
Sbjct 224031 AAAGTGCCTCCACTGGAACCCATAAACCGGACCCAAATCCCCCTCTTGCCTATGCCCCAA 224090
Query 27570 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 27629
|| |||||||| || | ||| || || || | ||||| ||||| |||||||||||
Sbjct 224091 CCCGGCCTTGTCCAGGAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTCTC 224150
Query 27630 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 27689
||| | ||| || | || || |||| |||||||| || || ||||| | || |
Sbjct 224151 GGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGATACC 224210
Query 27690 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
| ||||||| |||| || || | ||||||
Sbjct 224211 TCGCGTAAAGACCTTCTTTGTGGTCAAGAGGGG 224243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507033375347
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |