Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq33 138 8e-28 >seq33 Length=986392 Score = 138 bits (152), Expect = 8e-28 Identities = 196/273 (72%), Gaps = 6/273 (2%) Strand=Plus/Plus Query 27453 CAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG---TACTCTGCTCC 27509 || |||||| |||||| |||| ||| || | ||| || |||| |||||||| || Sbjct 223974 CAACTGATCGACCCCCTCCCCCTGGTAATC-ATCCT--TGGCCGTTCTATACTCTGCGCC 224030 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569 || |||||||| |||||||| || ||||| |||| || ||||||| ||| ||| | || Sbjct 224031 AAAGTGCCTCCACTGGAACCCATAAACCGGACCCAAATCCCCCTCTTGCCTATGCCCCAA 224090 Query 27570 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 27629 || |||||||| || | ||| || || || | ||||| ||||| ||||||||||| Sbjct 224091 CCCGGCCTTGTCCAGGAACTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTCTC 224150 Query 27630 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 27689 ||| | ||| || | || || |||| |||||||| || || ||||| | || | Sbjct 224151 GGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGATACC 224210 Query 27690 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | ||||||| |||| || || | |||||| Sbjct 224211 TCGCGTAAAGACCTTCTTTGTGGTCAAGAGGGG 224243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507033375347