Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq27 116 9e-21 seq10 113 1e-19 seq26 102 2e-16 >seq27 Length=880931 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || ||||| |||||||||||||||||||| | || | Sbjct 150180 GAGACGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCG 150121 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||| ||||| || | |||||||| | | ||| ||||| Sbjct 150120 GCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTC 150061 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| || ||| || || || || Sbjct 150060 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGT 150001 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 || || |||||||| |||||||| ||||||| Sbjct 150000 GATCGTCTTGCCCGTAAGAGTCTTGACGAAGA 149969 >seq10 Length=1588530 Score = 113 bits (124), Expect = 1e-19 Identities = 150/207 (72%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| |||||||||||||||||||| | || | ||||| || | Sbjct 1350983 CAAG-TGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGA 1351041 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| || | |||||||| | | ||| |||||||| ||||| | Sbjct 1351042 GCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGA 1351101 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 1351102 TCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGC 1351161 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||||||| ||||| ||||||| |||| Sbjct 1351162 CCGTGAGGGTCTTGACGAAGATTTGCA 1351188 >seq26 Length=1828681 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||| || |||||||| ||||||||||| ||||| | || | Sbjct 1062910 GAGACGGAGCACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCGAGCGTGCG 1062969 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || |||||||| | | ||||||||| | | || || || Sbjct 1062970 GCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATACCCTC 1063029 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| ||| ||| || || || || Sbjct 1063030 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGT 1063089 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| || ||||| || |||| ||||| Sbjct 1063090 GATTGTCTTGCCCGTCAGCGTCTTGACAAAGATTTGCAT 1063128 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| || |||||||||||||| || | || | Sbjct 1063138 GAGACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACG 1063197 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | || ||||| | | || || || Sbjct 1063198 GCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTC 1063257 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || ||||| | || | |||||||| ||| || || || || Sbjct 1063258 CTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCTGAAGACTCGACCTCGAGCGT 1063317 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || | ||||| || |||| ||||| Sbjct 1063318 GATGGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 1063356 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || |||||||||||||| || | || | ||||| || | Sbjct 1064062 CAAG-TGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCGAGCGTACGGCCATCCTCGA 1064120 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| || | || ||||| | | || || ||||| ||||| | Sbjct 1064121 GTTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGA 1064180 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| ||| ||| || || || || || || |||| Sbjct 1064181 TCTTGGTCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGTGTGATGGTCTTGC 1064240 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| || |||| |||||| Sbjct 1064241 CAGTCAGGGTCTTAACAAAGATCTGCAT 1064268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820253016827