Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900013405.1_202016-12- 23] 37 sequences; 25,667,824 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq27 168 2e-36 seq10 163 7e-35 seq26 141 2e-28 >seq27 Length=880931 Score = 168 bits (186), Expect = 2e-36 Identities = 161/205 (79%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || || ||||||||||||||||| || || ||| Sbjct 149965 CAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGAC 150024 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||| ||||| ||||| || ||||||||| Sbjct 150025 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAA 150084 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | || || |||||||| ||| || Sbjct 150085 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATC 150144 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 150145 CAAAAGGAGTCGACCCTCCA-CTTG 150168 >seq10 Length=1588530 Score = 163 bits (180), Expect = 7e-35 Identities = 160/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || || || |||||||||||||| || || ||| Sbjct 1351186 CAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGAC 1351127 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||| ||||| ||||| || ||||||||| Sbjct 1351126 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAA 1351067 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | || || |||||||| ||| || Sbjct 1351066 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAACATC 1351007 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 1351006 CAAAAGGAGTCGACGCTCCA-CTTG 1350983 >seq26 Length=1828681 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1302895 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1302836 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1302835 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1302776 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| || Sbjct 1302775 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1302716 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 1302715 CAGAAGGAGTCGACGCTGCA-CTTG 1302692 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1303123 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1303064 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1303063 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1303004 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| || Sbjct 1303003 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1302944 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 1302943 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1302908 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1303807 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1303748 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1303747 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1303688 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| || Sbjct 1303687 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1303628 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 1303627 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1303592 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1304263 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1304204 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1304203 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1304144 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| || Sbjct 1304143 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1304084 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 1304083 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1304048 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1304491 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1304432 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1304431 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1304372 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| || Sbjct 1304371 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1304312 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 1304311 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1304276 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1304719 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1304660 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1304659 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1304600 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| || Sbjct 1304599 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1304540 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 1304539 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1304504 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1304947 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1304888 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1304887 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1304828 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| || Sbjct 1304827 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1304768 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 1304767 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1304732 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1305175 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1305116 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1305115 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1305056 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| |||||||| ||||| | || || ||||| || ||| || Sbjct 1305055 CGTCTCATCTTTGCGGGAAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1304996 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || | || ||| | ||| Sbjct 1304995 CAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1304960 Score = 136 bits (150), Expect = 1e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || || || || || || |||||||||||||| || || ||| Sbjct 1063125 CAAATCTTTGTCAAGACGCTGACGGGCAAGACAATCACCCTCGAGGTCGAGTCTTCGGAC 1063066 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||| || || || || || |||||||| Sbjct 1063065 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAGCAG 1063006 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || |||||||| ||||| | || || ||||| || ||| || Sbjct 1063005 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAACATC 1062946 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || || || |||| Sbjct 1062945 CAGAAAGAGTCGACCCTTCA-CTTG 1062922 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1303351 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1303292 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1303291 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1303232 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || ||||| ||||| | || || ||||| || ||| | Sbjct 1303231 CGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAACATT 1303172 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||||| || || || || || | || ||| | ||| Sbjct 1303171 CAAAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1303136 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1303579 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1303520 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1303519 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1303460 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || ||||| ||||| | || || ||||| || ||| | Sbjct 1303459 CGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAACATT 1303400 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||||| || || || || || | || ||| | ||| Sbjct 1303399 CAAAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1303364 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || || || |||||||| |||||||| || ||| ||| Sbjct 1304035 CAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGAC 1303976 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||||| || || || || || ||||| ||| Sbjct 1303975 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 1303916 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || || ||||| ||||| | || || ||||| || ||| | Sbjct 1303915 CGTCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACGCTCGCCGACTACAACATT 1303856 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||||| || || || || || | || ||| | ||| Sbjct 1303855 CAAAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTC 1303820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730629356178