Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq44 89.7 1e-12 >seq44 Length=1311234 Score = 89.7 bits (98), Expect = 1e-12 Identities = 382/595 (64%), Gaps = 14/595 (2%) Strand=Plus/Plus Query 281585 CCAACCGGTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATA 281644 ||| || ||||| |||||| |||||||| |||||| | ||||| || || | || Sbjct 1113889 CCATCCCGTTCCGATACCATCCGAACCATTAACCAAAGCCATGGGGATGATGGGGATGTA 1113948 Query 281645 ACATTCTGGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCTGT 281704 || || || || || | |||||| || | | || | ||| | ||| ||||| | Sbjct 1113949 CCAAGACGGCTCGATGTTTTGACCATCGTCGTTGAGGTATTCCAGCACGTTGTCATCAGC 1114008 Query 281705 ATCGACGAAA-ACCTGTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCG 281763 || |||| || |||||| | | | ||||||||||| || | || | Sbjct 1114009 GG-GATGAAAGACGCTTCGCGTGATGGATGATACGTTCGTGAAGATGTAACGAGCCGAAG 1114067 Query 281764 CGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGG--CAACAACCAGTT 281821 | |||||||||||| ||||| | || || || ||||| | ||| | | || ||| Sbjct 1114068 CCGCGTCTTTACCACCTTGCAGACGCGTACCGAATTGACCGTTCGGGTCGAGAA--TGTT 1114125 Query 281822 AATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATAC 281881 | ||| ||| ||||||| | | || |||| | | ||| || || || | | Sbjct 1114126 GAGGTTGTTGGACCCGACGAACTGTTGCGCCAAGCCAATGATGGTGCCTTGCAAACTCAA 1114185 Query 281882 CTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTTCAC 281941 |||||||| || || || ||| || || || ||||| | | ||| | ||||| | Sbjct 1114186 ATCACCGTGATGGTACGCCGAGTGCTCAGCGACGTAACCGCCCAGTTGTCCGACCTTGAT 1114245 Query 281942 GTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---TATAATACTTTTCGTTGAGAAGGCTT 281998 || ||||| ||||| ||||| |||| | || || || |||||| || || Sbjct 1114246 CTCCTGCGTCAACTTGCGCTTGAA---GCAACCGAACAAGACCTTGCGTTGACCCGGTTT 1114302 Query 281999 GAAACCATCAACGACAGACGGAATGCTGCGTTCCAGGTCATACCGCGAGAACAAAATAAG 282058 ||| ||||||| |||||| ||||| || | ||| | ||||| | || | Sbjct 1114303 GAATCCATCAATGACAGAGGGAATCGAACGCACGTTGTCGGCCATTGAGAAGAGGATCAA 1114362 Query 282059 TTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCGGGCTTCTTGTGGTCAAGTTGGTTTC 282117 ||||||| ||||| | | || |||| || |||| | ||||||| || | | | Sbjct 1114363 CTCCTTGTTGATGAAATCCTCGATCGGG-ACTTCGGCGATGCTGTGGTCGAGGTACGTGC 1114421 Query 282118 CCGGCTCGTATGCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTTGAA 282172 | || || | | || |||||||||||| | |||||| |||||||||| Sbjct 1114422 CGGGGACGAAGCCTCGCAGCCACTCCTTGCGGTTGTCGGCCTTCTTCTTGTTGAA 1114476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822143188310