Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq89 93.3 3e-14 >seq89 Length=907297 Score = 93.3 bits (102), Expect = 3e-14 Identities = 224/337 (66%), Gaps = 4/337 (1%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||| ||||| || ||||| || ||| | | | | | Sbjct 229813 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTCTCCTTGATATTCTTGACAACC 229872 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044 || | ||||| || || || || || | |||||| || || | |||| |||| Sbjct 229873 TGCATCAATTGATCGACCCCCTCCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCTG 229930 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 | || |||||||||||||| || || || || ||||| | ||| || || || || | Sbjct 229931 CGCCAAAATGCCTCCACTGGAACCCGTAAACCGGTCCCAAATCCCCCTCTTCCCTATGCG 229990 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164 || |||| || || |||||| ||| ||||||||| |||||||||| | || || Sbjct 229991 CCAACCCAACCTTGTCCAAAAATTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCT 230050 Query 102165 CTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224 | || | | ||| ||| || ||||| | | ||||| | ||||| || | | Sbjct 230051 TGTCGGACAACAATTTCGAGTCGGTCGATCCGCGAACGAACCAAAGGAGTTCCTCGATGA 230110 Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261 |||| | ||| || |||| || || ||||| || Sbjct 230111 TGCCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGG 230147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250596823387