Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq89 109 6e-19 >seq89 Length=907297 Score = 109 bits (120), Expect = 6e-19 Identities = 232/344 (67%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCT 145983 ||||||||||| || | | || || |||||| ||||||| |||||| | | Sbjct 229807 GCCGGGTTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTCTCCTTGATATTCTTG 229866 Query 145984 ATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTA 146042 | | | | | | || || || |||| |||| | ||||| ||||| |||| || Sbjct 229867 ACAACCTGCATCAATTGATCGACCCCCTCCCCCTGATAATCATCCTTGGCCGTCCTA-TA 229925 Query 146043 CGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCT 146102 | | || || || |||||||||||||||||||| || || |||| ||||| ||||| Sbjct 229926 CTCTGCGCCAAAATGCCTCCACTGGAACCCGTAAACCGGTCCCAAATCCCCCTCTTCCCT 229985 Query 146103 GTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGAC 146162 ||| ||| ||| || | | | || | | || || || | ||||| |||||||| Sbjct 229986 ATGCGCCAACCCAACCTTGTCCAAAAATTGTCTCGATCCATTCCCATCCCAAATCTTGAC 230045 Query 146163 GCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTC 146222 ||| | |||| | | || ||||| || || || | | |||||| || || || || Sbjct 230046 CCCCTTGTCGGACAACAATTTCGAGTCGGTCGATCCGCGAACGAACCAAAGGAGTTCCTC 230105 Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 || || || | | |||||| ||||||| |||| ||||||| Sbjct 230106 GATGATGCCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGGGA 230149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075789493480