Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq45 158 3e-33 seq87 89.7 1e-12 >seq45 Length=1063883 Score = 158 bits (174), Expect = 3e-33 Identities = 479/734 (65%), Gaps = 17/734 (2%) Strand=Plus/Plus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| || ||||| | ||||| | Sbjct 39030 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTCGGC 39089 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| ||||| ||| || || | || || || |||||| Sbjct 39090 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 39149 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| ||||||||| | ||||| || || ||||| || ||| | ||| Sbjct 39150 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 39209 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || |||||| | ||| || |||| | || || ||| | Sbjct 39210 ATCGAGCGCGTCTTGCAGTCGTACAACTTCATGTCCGAGCGCTACTTCACCCACGCCTCG 39269 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG- 249055 |||||||||||||||||||| || | || || ||||| ||||| || | | || | Sbjct 39270 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCT---CTCGTCCTGTTTCCTGGT 39325 Query 249056 --CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAA 249110 | ||| | ||||| || | || ||||| || ||||| || | ||||| ||| Sbjct 39326 CACGATGAAGGACGATTCGATTGAAGGCATCTACGACACACTCA---AGACGTGCGCGCT 39382 Query 249111 GATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTC 249170 || || || ||| || || |||||| | | || ||||||||| |||| || || Sbjct 39383 CATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTC 39442 Query 249171 GTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGA 249230 |||||| || || ||||| | | || ||||| ||| | || || || | Sbjct 39443 CTACATCGCCGGCACGAATGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAA 39502 Query 249231 GTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTA 249287 |||||| | | | || |||| | || | || || | ||||| || || Sbjct 39503 CAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTA 39562 Query 249288 TTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAA 249347 | || |||||||||||| | || |||||||||||| | |||||| ||||||| Sbjct 39563 CCTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAA 39622 Query 249348 CGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCG 249407 ||| | | || ||||| ||||||| | || ||| | |||| | |||||| Sbjct 39623 GGAGGAAGTCCGCGCTCGTGATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGA 39682 Query 249408 CCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCAT 249467 || ||| |||||| |||||| ||| | || | | || |||| ||||| | |||| Sbjct 39683 GCGTGTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCA 39742 Query 249468 CGATCTACACGGCG 249481 ||| | |||||| Sbjct 39743 CGAAGTCTACGGCG 39756 >seq87 Length=1238431 Score = 89.7 bits (98), Expect = 1e-12 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 115388 TCGAAAACCTTAATATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGT 115447 |||| |||| || || || |||| ||||||||||| |||||||| ||| || | || Sbjct 843763 TCGAGTACCTCAAGATGGCGCATCGACTCTGAATCGGCTCGATGATCTTGTTGCTCTGGT 843822 Query 115448 TGCAGACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCT 115507 |||| | | | ||| || || ||| | ||| | | ||||| ||| ||| ||||| | Sbjct 843823 TGCACGCAAAGGCGAAGCGAGTGGTGTTGGAGAAGATTTCCATCGTCCTTCGGAGCGCTT 843882 Query 115508 GGAAAGCACCAGGTGTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 | || || || ||||||||||| || |||||||| | ||| | ||| Sbjct 843883 GTTGGGCTCCCGGGGTCATCGAGTCGGCTTCGTCGAGGATGACGAGCTT 843931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764515204416