Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq87 104 2e-17
>seq87
Length=1238431
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| ||||| | ||| | |||||
Sbjct 436732 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCGTCCTC 436791
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| |||| ||||| ||||| ||||| || || ||||| |
Sbjct 436792 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTG 436851
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || | ||||||| | ||| ||||| | ||||| || | ||||| || ||
Sbjct 436852 AATCTTGGTCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATCGTCTT 436911
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || ||||| || ||||| |||||
Sbjct 436912 GCCAGTGAGCGTTTTAACGAAGATTTGCAT 436941
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839
||| |||| | |||| ||||||||||| || |||||||| || | ||| || |||
Sbjct 677933 TCCGCCTCGGAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCG-- 677990
Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897
| || || || ||||| ||||| || || | ||||| |||| ||||| || |||
Sbjct 677991 GAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGA 678050
Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957
||||| || || ||||| | || || |||||||| | ||| ||||| | | |||
Sbjct 678051 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCG 678110
Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | |||||| || || || || || || || || || || |||||
Sbjct 678111 ACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 678160
Score = 100 bits (110), Expect = 3e-16
Identities = 168/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||| | || | ||||||||||| || || ||||| || | |
Sbjct 436475 AAAATTTGCATACCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATG 436534
Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
|| || ||| | || || || ||||||| ||| || || ||||||| | | |
Sbjct 436535 TTGTAGTCG--GAGAGCGTGCGACCGTCCTCCAACTGCTTGCCCGCAAAGATGAGACGCT 436592
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
| || ||||| ||||| || || ||||| | ||| || | ||||||| | ||| ||||
Sbjct 436593 GTTGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGT 436652
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | ||||| || | |||||| || || ||||| || || || |||||||| ||||
Sbjct 436653 CTGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACAAAGATTTGCA 436712
Query 95007 T 95007
|
Sbjct 436713 T 436713
Score = 100 bits (110), Expect = 3e-16
Identities = 168/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||| | || | ||||||||||| || |||||||| || | |
Sbjct 678378 AAAATTTGCATACCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGATTCCTTCTGAATG 678437
Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
|| || ||| | || || || ||||| ||||| || || | ||||| |||| |
Sbjct 678438 TTGTAGTCG--GAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCT 678495
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
|||| || || ||||| || || ||||| | || || ||||||||| | ||| ||||
Sbjct 678496 GCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGT 678555
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | | ||||| || | |||||| || || || || | ||| || || || || ||||
Sbjct 678556 CCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCTGTCAAAGTCTTGACGAAAATTTGCA 678615
Query 95007 T 95007
|
Sbjct 678616 T 678616
Score = 96.9 bits (106), Expect = 3e-15
Identities = 167/241 (69%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||| | || | ||||||||||| || |||||||| || | |
Sbjct 678150 AAAATTTGCATACCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGATTCCTTCTGAATG 678209
Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
|| || ||| | || || || ||||| ||||| || || | ||||| |||| |
Sbjct 678210 TTGTAGTCG--GAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCT 678267
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
|||| || || ||||| || || ||||| | || || |||||||| | ||| ||||
Sbjct 678268 GCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGT 678327
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | | ||||| || | |||||| || || || || || || || || || || ||||
Sbjct 678328 CTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCA 678387
Query 95007 T 95007
|
Sbjct 678388 T 678388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290432301320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |