Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq27 84.2 4e-11
>seq27
Length=1194495
Score = 84.2 bits (92), Expect = 4e-11
Identities = 252/389 (65%), Gaps = 0/389 (0%)
Strand=Plus/Plus
Query 193779 GTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTA 193838
|| ||| |||| || || || ||| ||| ||||||| || | | || || | |
Sbjct 53120 GTCCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAA 53179
Query 193839 TCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTAT 193898
|| || || || || || | || || || ||||| || || || |||||||| ||||
Sbjct 53180 TCCGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGGTTTC 53239
Query 193899 TGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTC 193958
|||||| ||||||| || || ||||| || | | |||| | ||||| | |||
Sbjct 53240 TGGATCGTCAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTC 53299
Query 193959 AATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTA 194018
|| ||||| || || | | ||| || || || || | ||||| | | || | |
Sbjct 53300 AACCACGAGTCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAGATCTCGCGAGCTGTC 53359
Query 194019 TCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGG 194078
| ||||||| | || |||| | || || || || || | | || ||| |
Sbjct 53360 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGT 53419
Query 194079 GATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAA 194138
|||||||||||||| || || || || | |||||| | ||| |||| || ||
Sbjct 53420 GATTGGGGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACACC 53479
Query 194139 CCCGATGATTATGTGATTGCTACAGGTGA 194167
||||| || | ||| | || || |||||
Sbjct 53480 CCCGACGACTTTGTCCTCGCGACGGGTGA 53508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807553817061720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |