Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq87 134 1e-26 seq44 129 6e-25 seq47 118 1e-21 seq89 82.4 7e-11 >seq87 Length=1238431 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||||||||||| ||||||||||||||| Sbjct 436259 CCACCACGAAGACGGAGCACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAATCGGAG 436318 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| || ||||| ||||| || || Sbjct 436319 AGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGA 436378 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||||| Sbjct 436379 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACC 436438 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || ||||| || || || |||||||| ||||| Sbjct 436439 TCGAGCGTAATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 436485 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||||||| || || | ||||| ||||| ||||||||||| ||| Sbjct 677934 CCGCCTCGGAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAG 677993 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| |||| || ||||||||||| ||||| Sbjct 677994 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 678053 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 678054 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACC 678113 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || |||||||| ||||| Sbjct 678114 TCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 678160 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||||||||| || ||||||||||| Sbjct 436715 CCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 436774 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| || ||||||||||| || || Sbjct 436775 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 436834 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||||| Sbjct 436835 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGATGACTCGACC 436894 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || ||||| ||||| || ||||| Sbjct 436895 TCGAGGGTGATCGTCTTGCCAGTGAGCGTTTTAACGAAGATTTGCAT 436941 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | ||||| ||||| ||||||||||| ||| Sbjct 678162 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAG 678221 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| |||| || ||||||||||| || || Sbjct 678222 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGA 678281 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 678282 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACC 678341 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || |||||||| ||||| Sbjct 678342 TCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 678388 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | ||||| ||||| ||||||||||| ||| Sbjct 678390 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAG 678449 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| |||| || ||||||||||| || || Sbjct 678450 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGA 678509 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 678510 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 678569 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || | ||| || |||||||| ||||| Sbjct 678570 TCGAGCGTGATCGTCTTGCCTGTCAAAGTCTTGACGAAAATTTGCAT 678616 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | ||||||||||| ||||||||||| ||| Sbjct 436487 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 436546 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| | ||||||||| || |||| | |||||| ||||| || || Sbjct 436547 AGCGTGCGACCGTCCTCCAACTGCTTGCCCGCAAAGATGAGACGCTGTTGGTCTGGGGGA 436606 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||||| Sbjct 436607 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACC 436666 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || || || || ||||| Sbjct 436667 TCGAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACAAAGATTTGCAT 436713 >seq44 Length=1311234 Score = 129 bits (142), Expect = 6e-25 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || ||||| || || | ||||||||||||||| |||||||| || Sbjct 308780 CCACCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 308721 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | ||| |||||||| || ||| Sbjct 308720 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGG 308661 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| ||||||| Sbjct 308660 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 308601 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233 |||| ||| | ||| || || || || || || ||||| || |||| Sbjct 308600 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 308555 >seq47 Length=302882 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || || || | ||||||||||||||| |||||||| || Sbjct 149750 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 149691 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | ||| |||||||| || ||| Sbjct 149690 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 149631 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| ||||||| Sbjct 149630 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 149571 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || || || || ||||| || ||||| || ||| || Sbjct 149570 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 149523 >seq89 Length=907297 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/220 (70%), Gaps = 5/220 (2%) Strand=Plus/Minus Query 46234 GGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCAT 46293 ||| | |||||||| |||| || ||||||||| || ||||| ||||||||||| || Sbjct 77366 GGCTTGATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCAC 77307 Query 46294 ACGGACTTTGCGTGTCTCTACTA-TAACACTCGCGTGCACGACAAGCTTGCGCCCGACAC 46352 || |||||||| || |||| | | ||| | || || || | || | |||||||| Sbjct 77306 ACCGACTTTGCTTGCCTCTTGTTCTCCCAC-CTCGAGC--GAAGACCTCAC-CCCGACAC 77251 Query 46353 CGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACT 46412 ||| | ||| |||||||||| || | || |||||||| || || || | || || Sbjct 77250 CGTCGCGCTCATCATCAAGGAGGCCGTCGAGATCGAGAAGGAATTCTTGACCGAGGCTCT 77191 Query 46413 GCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGC 46452 ||| | || | |||||||| || || |||||| Sbjct 77190 TCCCTGCGGTTTGATCGGCATGAATGCCAAGCTCATGTGC 77151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011991678080