Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq87 122 7e-23
seq47 113 4e-20
seq44 113 4e-20
>seq87
Length=1238431
Score = 122 bits (134), Expect = 7e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | || || || ||| |||| || || || || | |
Sbjct 436713 ATGCAAATCTTTGTCAAGACGCTCACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCA 436654
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || ||||||||||||||||| ||||| || || |||
Sbjct 436653 GACACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAA 436594
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| ||||| ||||| ||||| ||||| ||||||| ||||||
Sbjct 436593 CAGCGTCTCATCTTTGCGGGCAAGCAGTTGGAGGACGGTCGCACGCTCTCCGACTACAAC 436534
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || || || ||
Sbjct 436533 ATTCAGAAGGAGTCGAC 436517
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | ||||| || ||| | || || || || || | |
Sbjct 436485 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATTACGCTCGAGGTCGAGTCGTCA 436426
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || ||||||||||||||||| ||||| || || |||
Sbjct 436425 GACACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAA 436366
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || ||||| ||| | ||||| ||||| ||||||||||||||
Sbjct 436365 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACGCTCTCCGATTACAAC 436306
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| || || || || | ||||| ||
Sbjct 436305 ATTCAGAAGGAGTCGACGCTTCATTTGGT 436277
Score = 111 bits (122), Expect = 1e-19
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||||||||| || || ||||| || || || ||| |||| || || || || ||
Sbjct 678618 AGATGCAAATTTTCGTCAAGACTTTGACAGGCAAGACGATCACGCTCGAGGTCGAGTCCT 678559
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| | |||| || || || ||||||||||| ||||| ||||| |
Sbjct 678558 CGGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACC 678499
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || || | || || || || || ||| | ||||| ||||| ||||||| ||||
Sbjct 678498 AGCAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACA 678439
Query 22397 ACATTCAAAAAGAATCCAC 22415
||||||| || ||||| ||
Sbjct 678438 ACATTCAGAAGGAATCGAC 678420
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | ||||| || ||| |||| || || || || || |
Sbjct 678160 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 678101
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || || ||||||||||| ||||| ||||| ||
Sbjct 678100 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 678041
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || || ||| | ||||| ||||| ||||||| ||||||
Sbjct 678040 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 677981
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
||||| || ||||| || | || || || ||||
Sbjct 677980 ATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCG 677946
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | ||||| || ||| |||| || || || || || |
Sbjct 678388 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 678329
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || || ||||||||||| ||||| ||||| ||
Sbjct 678328 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 678269
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || || ||| | ||||| ||||| ||||||| ||||||
Sbjct 678268 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 678209
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || ||||| ||
Sbjct 678208 ATTCAGAAGGAATCGAC 678192
Score = 102 bits (112), Expect = 7e-17
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| || |||||||| | || || || ||| |||| || || || || |
Sbjct 436943 AGATGCAAATCTTCGTTAAAACGCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCAT 436884
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| | |||| || ||||||||||||||||| ||||| || || |
Sbjct 436883 CAGACACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACC 436824
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || || | || || || ||||| ||| | ||||| |||||| || | |||||||
Sbjct 436823 AGCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCGGATTACA 436764
Query 22397 ACATTCAAAAAGAATCCAC 22415
|||| || || || || ||
Sbjct 436763 ACATCCAGAAGGAGTCGAC 436745
>seq47
Length=302882
Score = 113 bits (124), Expect = 4e-20
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280
|||||| || || || ||| | || || || ||| |||| || || || || | ||||
Sbjct 149526 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 149585
Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340
|| | ||| | |||| || || ||||||||||| || || || || || || ||
Sbjct 149586 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 149645
Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400
|||||| || ||||||||||| ||| | |||||| |||||| || | || ||||||||
Sbjct 149646 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACAT 149705
Query 22401 TCAAAAAGAATCCACCATACATTTAGT 22427
||||| || || ||| | || || ||
Sbjct 149706 CCAAAAGGAGTCGACCCTCCACTTGGT 149732
>seq44
Length=1311234
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279
||||||| || || || || | || || || || |||| || || || || | |||
Sbjct 308555 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 308614
Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339
| || | ||| | |||| || || ||||||||||| || || || ||||| || |
Sbjct 308615 ACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCCGACCAGC 308674
Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399
||||||| || ||||||||||| ||| | |||||| |||||| || | || |||||||
Sbjct 308675 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACA 308734
Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| ||||| || || ||| | || || || | || | ||||| |||
Sbjct 308735 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTCCGCGGTGGT 308781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727299185405
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |