Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq27 219 8e-52
seq44 196 9e-45
seq89 179 7e-40
seq47 172 1e-37
seq87 170 4e-37
seq117 96.9 6e-15
>seq27
Length=1194495
Score = 219 bits (242), Expect = 8e-52
Identities = 303/419 (72%), Gaps = 4/419 (1%)
Strand=Plus/Minus
Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305
||| ||||| ||||||| | ||||| ||||| ||||| || |||||||| ||||| ||
Sbjct 53470 CTGCAGCATCATCCACATGCCCTCGACGTAGTCGCGCGCGTGTCCCCAATCACGCTTGGC 53411
Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGC 268364
|||||||| |||||| | ||||| | ||| | |||||| | | || || | | | |
Sbjct 53410 CTCCATGTTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCG-GCGACAGCTC 53352
Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424
| | ||| || | || ||||| || ||||| | ||| |||||||||||| | ||
Sbjct 53351 GCGAGATCTTCCTCGTGACGAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAACAAGA 53292
Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAA 268484
| |||||||| ||| |||| | || | ||| ||||||||| ||| ||||| | |
Sbjct 53291 TACCGTTGCATGCGTACATATCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAACCGT 53232
Query 268485 ACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGA 268544
||| ||| || ||| |||| || ||||| || | |||||||||||| |||||||
Sbjct 53231 ACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGAGGGG 53172
Query 268545 TTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTT 268603
| || ||| |||||| | | |||||||||||| ||||||||||| | || ||
Sbjct 53171 TCTCCACGACCTTGCCATACAACTCGGAGGTCGAGGCTTGGTAGAAGCGGACGTGCTTGG 53112
Query 268604 TCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662
|| || |||||| ||||||| || ||||| | ||| || ||||| | || || |||||
Sbjct 53111 TCAAG-CCGCAGGTTCGGATCGCATCGAGGAGACGCAGTGTTCCAAGACCGTCGACGTC 53054
>seq44
Length=1311234
Score = 196 bits (216), Expect = 9e-45
Identities = 179/226 (79%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||| | |||||||| || || ||||| ||||||||||| || || | |
Sbjct 308780 CCACCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 308721
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| ||||| || ||||| | ||| |||||||| ||
Sbjct 308720 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGG 308661
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || ||
Sbjct 308660 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 308601
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460
|| | ||||||||| || |||||||||||||||||||| || ||||
Sbjct 308600 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 308555
>seq89
Length=907297
Score = 179 bits (198), Expect = 7e-40
Identities = 281/397 (71%), Gaps = 4/397 (1%)
Strand=Plus/Plus
Query 268268 TCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGG 268327
|| || || || || || || |||||||| ||||| || |||| ||| |||||| | |||
Sbjct 275243 TCAACGTAATCGCGGGCGTGTCCCCAATCACGCTTGGCCTCCAAGTTACCGAGGTAAAGG 275302
Query 268328 CATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAA 268386
|| | ||| | |||||| | | || || | |||| | ||| |||| || |||||
Sbjct 275303 CAATCCTGTTGACCGAGCGAAATCTCG-GCGACGGCGCGCGAGATCTTTCTCGTGACGAA 275361
Query 268387 CGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCC 268446
|| |||||| | ||| ||||||||||||||| || |||||||||||| ||||| |
Sbjct 275362 GGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGAATACCGTTGCACGCGTACATGTC 275421
Query 268447 ATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGG 268506
|| | ||| ||||||||| ||| ||||| | || ||| ||| || ||| |||| ||
Sbjct 275422 GTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAACTTGGCGACTCCGTAGGG 275481
Query 268507 AGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAG 268566
|| || || | |||||| ||||| |||||| | || ||| ||||| | |
Sbjct 275482 CGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCGACGACCTTGCCGTACAA 275541
Query 268567 CTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTG 268625
||| |||||||| || |||||||| | || || || || ||||| | ||||| |
Sbjct 275542 CTCCGAGGTCGAGGCCTGGTAGAAGCGGACGTGCTTGGTCAAG-CCGCAAGTGCGGATGG 275600
Query 268626 CCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662
| ||||| | ||| || ||||||| || || || ||
Sbjct 275601 CGTCGAGGAGACGGAGTGTTCCCAGACCGTCAACATC 275637
Score = 98.7 bits (108), Expect = 2e-15
Identities = 119/159 (75%), Gaps = 5/159 (3%)
Strand=Plus/Plus
Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996
|||| |||| ||| ||||| |||||||| || ||| || ||||| | |||||||||||
Sbjct 76913 TGAC-CCCGACTTTTGGTAATCCGATACACGCTTCTCAAAAAAGTTTGTCTTGCCCTCGA 76971
Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG--CCAAACTGCTTGGGGTAACC 10054
| ||||| | | ||| ||||| || |||||||||||| ||| || |||||||| ||
Sbjct 76972 GCGAAATCATATTCATAAAGTCGAAAGGGTTCTCGGCGTTCCAGAC--CTTGGGGTTGCC 77029
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTA 10093
| || || | ||||| || || |||||||||||
Sbjct 77030 CAAGGCGACCAACAATCGGTCGGCGACAAACTCGATGTA 77068
>seq47
Length=302882
Score = 172 bits (190), Expect = 1e-37
Identities = 173/225 (77%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||||||| || || ||||| ||||||||||| || || | |
Sbjct 149750 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 149691
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| ||||| || ||||| | ||| ||||| || ||
Sbjct 149690 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 149631
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || ||
Sbjct 149630 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 149571
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | |||||| || || ||||| || ||||||||||| || |||
Sbjct 149570 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 149526
>seq87
Length=1238431
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| ||||| ||||| || || ||||| || ||||||
Sbjct 436487 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 436546
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || |||||||| || || || ||||| | |||||||| || |||
Sbjct 436547 AGCGTGCGACCGTCCTCCAACTGCTTGCCCGCAAAGATGAGACGCTGTTGGTCTGGGGGA 436606
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||||||||| | ||||||| ||||| ||||||| || || ||
Sbjct 436607 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACC 436666
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || ||||| |||||||| || || |||||
Sbjct 436667 TCGAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACAAAGATTTGCAT 436713
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | ||||| || ||||| ||||| || || ||||| |||||||||
Sbjct 436259 CCACCACGAAGACGGAGCACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAATCGGAG 436318
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | || |||||||| || |||
Sbjct 436319 AGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGA 436378
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||||||||| | ||||||| ||||| ||||||| || || ||
Sbjct 436379 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACC 436438
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || || || || || ||||||||||| || |||||
Sbjct 436439 TCGAGCGTAATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 436485
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| ||||| ||||| || |||||||| ||||| | |
Sbjct 436715 CCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 436774
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | || || ||||| || |||
Sbjct 436775 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 436834
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||||||||| | ||||||| ||||| ||||||| ||| || ||
Sbjct 436835 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGATGACTCGACC 436894
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || || ||||| || || ||||| || |||||
Sbjct 436895 TCGAGGGTGATCGTCTTGCCAGTGAGCGTTTTAACGAAGATTTGCAT 436941
Score = 159 bits (176), Expect = 6e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || || || |||| |||||||| ||||| || || || || ||||| || |||||
Sbjct 677933 TCCGCCTCGGAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGA 677992
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| || | || || || | |||||| || ||||| || | || || |||||||| ||
Sbjct 677993 GAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGG 678052
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
|||||| |||||||| || ||||| |||||||| ||||| ||||||| || || ||
Sbjct 678053 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGAC 678112
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || || || ||||||||||| || |||||
Sbjct 678113 CTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 678160
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| ||||| || || || || ||||| || ||||||
Sbjct 678162 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAG 678221
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | || || |||||||| |||
Sbjct 678222 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGA 678281
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| |||||||| ||||| ||||||| || || ||
Sbjct 678282 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACC 678341
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || || || ||||||||||| || |||||
Sbjct 678342 TCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 678388
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| ||||| || || || || ||||| || ||||||
Sbjct 678390 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAG 678449
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | || || |||||||| |||
Sbjct 678450 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGA 678509
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| ||||||||| ||||| ||||| | || || ||
Sbjct 678510 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 678569
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| || || || || | ||||||||||| || |||||
Sbjct 678570 TCGAGCGTGATCGTCTTGCCTGTCAAAGTCTTGACGAAAATTTGCAT 678616
>seq117
Length=2006698
Score = 96.9 bits (106), Expect = 6e-15
Identities = 131/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| ||||||||||||||||| | | ||| | || ||||| | ||| || ||||||||
Sbjct 484719 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATGTGGTGGAAC 484660
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| || ||||| |||||||| | |||| ||||||||||||| || | || |||
Sbjct 484659 GCGTGTTGGGCGACGTACGCGACACGCAAGTTGGGATGCTTCTCGACCTTG-CCTTCGTC 484601
Query 225098 -GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156
|| | |||||| || | || |||||| | || | ||| || ||||| ||||||||
Sbjct 484600 GGGCACGGTCTCGCCCGTCAAGAGCTTGATCAAGGTCGACTTACCGGCACCGTTGGGGCC 484541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620821721640
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