Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq87 127 5e-24
seq47 118 3e-21
seq27 114 3e-20
seq44 111 4e-19
seq89 86.0 1e-11
>seq87
Length=1238431
Score = 127 bits (140), Expect = 5e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
||||| || ||||| | || || | || | ||| ||| || || || || ||||||
Sbjct 677931 TGTCCGCCTCGGAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCG 677990
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| ||||||||| ||||| || | || || || |||||||||| ||||| ||
Sbjct 677991 GAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGA 678050
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || || |||||||| || || || || || || || | || || ||
Sbjct 678051 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCG 678110
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||| |||||||| ||||||||||| || |||||
Sbjct 678111 ACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 678160
Score = 123 bits (136), Expect = 6e-23
Identities = 168/233 (72%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || || | || || | ||||| ||| || || || || || || |||
Sbjct 436256 TGACCACCACGAAGACGGAGCACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAATCG 436315
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| ||||||||| ||||| || | || || || |||||||||| |||||||| |||
Sbjct 436316 GAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGG---TCT 436372
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || || || || || || || || | || ||||| || || | || |||
Sbjct 436373 GGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGAC 436432
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || |||||||| |||||||| |||||||| ||||||||||| || |||||
Sbjct 436433 TCGACCTCGAGCGTAATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 436485
Score = 123 bits (136), Expect = 6e-23
Identities = 145/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || || || || ||||||| ||||||||| ||||| || | || || || |||||
Sbjct 678197 TTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 678256
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| ||||| || || ||| || || || || |||||||| || || || ||
Sbjct 678257 GATCAATCGCTGCTGG---TCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC 678313
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || || | || || || || ||||||||||||||||| |||||||| |||||
Sbjct 678314 ATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTT 678373
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 678374 GACGAAAATTTGCAT 678388
Score = 123 bits (136), Expect = 6e-23
Identities = 145/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || || || || ||||||| ||||||||| ||||| || | || || || |||||
Sbjct 678425 TTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 678484
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| ||||| || || ||| || || || || |||||||| || || || ||
Sbjct 678485 GATCAATCGCTGCTGG---TCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC 678541
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || || | || || || || ||||||||||||||||| || |||| ||||||
Sbjct 678542 GTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCTGTCAAAGTCTT 678601
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 678602 GACGAAAATTTGCAT 678616
Score = 116 bits (128), Expect = 9e-21
Identities = 143/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||||| ||||||||| ||||| || || || || || || |||
Sbjct 436523 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCCAACTGCTTGCCCGCAAAG 436582
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| ||||||||||| |||||| || || || || || || || || | || |||
Sbjct 436583 ATGAGACGCTGTTG---GTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGACG 436639
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || ||| || || ||||||||||||||||| || || || ||||||
Sbjct 436640 TTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTGAGCGTCTTG 436699
Query 288460 ACGAATATCTGCAT 288473
|| || || |||||
Sbjct 436700 ACAAAGATTTGCAT 436713
Score = 100 bits (110), Expect = 7e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | ||| || || ||||| || || || |||
Sbjct 436715 CCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 436774
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| ||||| || | || || || |||||||||| ||||| || ||||||
Sbjct 436775 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTG---GTCTGGG 436831
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || || || || || | || ||||| || || | || || ||
Sbjct 436832 GGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGATGACTCG 436891
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||||||||| || || || || || ||||| || |||||
Sbjct 436892 ACCTCGAGGGTGATCGTCTTGCCAGTGAGCGTTTTAACGAAGATTTGCAT 436941
>seq47
Length=302882
Score = 118 bits (130), Expect = 3e-21
Identities = 142/192 (74%), Gaps = 6/192 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||| ||||| ||||| || || || | || || || || |||
Sbjct 149714 TCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 149655
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| ||||| || || ||||| ||| ||||| || || ||||| || | || |||
Sbjct 149654 ATGAGACGTTGCTGG---TCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACG 149598
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| ||| || || ||||| ||||||||||| || || |||||||||
Sbjct 149597 TTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTG 149538
Query 288460 ACGAATATCTGC 288471
||||| || |||
Sbjct 149537 ACGAAGATTTGC 149526
>seq27
Length=1194495
Score = 114 bits (126), Expect = 3e-20
Identities = 249/367 (68%), Gaps = 8/367 (2%)
Strand=Plus/Plus
Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475
|||||| || | || ||||||||||| || || || | ||||| | || | ||
Sbjct 53131 CCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAATCCGAGACGAC 53190
Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535
|| || || ||||| |||||||| || || |||||||||| || |||||| ||
Sbjct 53191 GCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGGTTTCTGGATCGTCAA 53250
Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595
|| ||||| |||||||| | ||||| | ||||||| || | ||||| ||| |||
Sbjct 53251 GAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTCAACCAC--GAG 53308
Query 72596 TCCCAAC--AGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATT 72653
|||| | | || | ||||| || | || ||| || | ||||| | | |
Sbjct 53309 TCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAGATCTCGCGAGCTGTCGCCGAGA-T 53367
Query 72654 TTCAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGG 72711
|| | | ||| | | | ||| | || ||||| || || || ||||| | |||||||
Sbjct 53368 CTCGCTCG-GTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGTGATTGGG 53426
Query 72712 GATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATG 72771
|| | ||| || ||||| || | |||||| |||||||||| ||||| || || || |
Sbjct 53427 GACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACACCCCCGACG 53486
Query 72772 ACTATGT 72778
||| |||
Sbjct 53487 ACTTTGT 53493
>seq44
Length=1311234
Score = 111 bits (122), Expect = 4e-19
Identities = 160/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | || || | || | || || |||||||| || ||||| |||
Sbjct 308780 CCACCGCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 308721
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || || ||||| ||||| || || |||
Sbjct 308720 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGG 308661
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || | || ||||| || || | ||| ||| || ||
Sbjct 308660 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 308601
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472
||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct 308600 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 308555
>seq89
Length=907297
Score = 86.0 bits (94), Expect = 1e-11
Identities = 213/320 (67%), Gaps = 4/320 (1%)
Strand=Plus/Minus
Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475
||| || || | || |||||||| || || || || | |||||| | || | ||
Sbjct 275560 CCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACGAC 275501
Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535
|| || || ||||| || ||||| || || ||||||||||| | |||||| ||
Sbjct 275500 CCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTCAA 275441
Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595
|| ||||| |||||||| ||||||| | |||||| ||| ||||| ||||||
Sbjct 275440 GAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATTCTCTTCAACCACGAGTC 275381
Query 72596 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 72655
||| | | |||| ||||| || | || ||| || | ||||| | | |||
Sbjct 275380 CCCCCGCCGTGGCCGCACCTTCGTCACGAGAAAGATCTCGCGCGCCGTCGCCGAGA-TTT 275322
Query 72656 CAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGA 72713
| | | ||| | | | ||| | || |||||||| | || ||||| | |||||||||
Sbjct 275321 CGCTCG-GTCAACAGGATTGCCTTTACCTCGGTAACTTGGAGGCCAAGCGTGATTGGGGA 275263
Query 72714 TATGCGAAGGATTACGTAGA 72733
| || |||||||| ||
Sbjct 275262 CACGCCCGCGATTACGTTGA 275243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179652329337886
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