Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq45 201 1e-46 seq44 131 2e-25 seq27 125 9e-24 seq89 89.7 6e-13 >seq45 Length=1063883 Score = 201 bits (222), Expect = 1e-46 Identities = 559/848 (66%), Gaps = 11/848 (1%) Strand=Plus/Minus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || || || | | ||| ||| | | |||||| || ||||| Sbjct 40012 GCGATCGAGGCCAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCA 39953 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || || | || || ||| || ||||| | ||||||||| || || ||| |||| Sbjct 39952 GTGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA 39893 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || |||||||| |||||| | || | || || || |||| | |||||| || | | Sbjct 39892 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATAC 39833 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 39832 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 39774 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 | | | ||||||||| || | | || ||| || || || | | |||||||| Sbjct 39773 CAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 39714 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||| | ||| | || | |||| ||||||| ||||||||| || || ||||||||||| Sbjct 39713 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAGC 39654 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 |||||||||| ||| ||| |||| || | || || || || | |||| || Sbjct 39653 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 39594 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945 || | || || ||||||||||| || ||||| | ||||| | || ||| Sbjct 39593 CTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 39534 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 ||| | |||| || || | ||| ||| || | || || ||||| || | ||| || Sbjct 39533 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCC 39474 Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063 | || | |||||| || || ||| || ||| | | || | || | |||||| Sbjct 39473 GTTCGAGTAGCCATTCGTGCCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 39416 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 || ||| ||||| || || ||| ||||| |||||||| | |||| || ||||| Sbjct 39415 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAG 39356 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || || ||||| || |||| | | || ||||| ||| ||| | || || Sbjct 39355 ATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGA 39296 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243 || || || ||||||||||| || || | |||||| |||| | | |||||| Sbjct 39295 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAAG 39236 Query 115244 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 | ||| | || ||||||| || | ||||| | ||||| || |||| | ||| ||||| Sbjct 39235 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACACGCAT 39177 Query 115303 AAACATGT 115310 | ||||| Sbjct 39176 GAGCATGT 39169 >seq44 Length=1311234 Score = 131 bits (144), Expect = 2e-25 Identities = 340/506 (67%), Gaps = 23/506 (5%) Strand=Plus/Plus Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581 ||||||| ||||||| ||| || || | | | ||| | | || ||| || |||||| Sbjct 1114685 CCCTTGGTTGCCTTGACGATGGGGGTGATGAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 1114743 Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641 | || || | |||| | || | || | ||| |||||||||||||| || ||||| Sbjct 1114744 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTAATGTGCGATCCATC 1114803 Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701 || |||| ||| | ||| ||||| ||| || || || ||| | || || || Sbjct 1114804 GTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCAGTGTA 1114863 Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761 | |||||||| || ||||||||||||| ||||| | ||||| ||| || | ||| Sbjct 1114864 GACTTTACCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 1114919 Query 172762 -GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACA 172817 ||| | ||| | | || || || || || |||| || || | ||||| | Sbjct 1114920 CGAGGAGGGCCTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAGGGGAAGA 1114979 Query 172818 CACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 172877 |||| |||| || ||||| || |||| ||||| | || ||||| | ||| ||||||| Sbjct 1114980 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGACACGGCGAGCGCCTTGGCGGAAT 1115039 Query 172878 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 172935 | || || |||| ||||||||| ||||| || | | | ||| || || | |||||| Sbjct 1115040 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTGGTTCGC 1115097 Query 172936 ATCGTCCAACTTGGGAATACCAGTAATTTTGGA---CTTGCGGGCACCATCTGTCTTCTT 172992 ||| || | |||| || ||| || || || ||| | || || |||||||| Sbjct 1115098 ATCCTCGAGCTTGACAAGACCCGTGATACGCGATCGCTTATGT---CCGTCCGTCTTCTT 1115154 Query 172993 GAGTTCCTTCATCTCCTTGAACTTGG 173018 ||| || || ||||||||||| Sbjct 1115155 GAGCATCTGGTCCTGCTTGAACTTGG 1115180 >seq27 Length=1194495 Score = 125 bits (138), Expect = 9e-24 Identities = 279/411 (68%), Gaps = 6/411 (1%) Strand=Plus/Plus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || ||||| || |||| ||| ||| ||| || || ||| |||||||| ||| | Sbjct 53129 TACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAATCCGAGACG 53188 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGT 8644 || |||||||| || || || || || ||| | ||| | | ||| | || |||| Sbjct 53189 ACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGGTTTCT-GGATCGT 53247 Query 8645 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGA 8704 ||||| ||||| || || || | | | | || ||| |||||| | ||||||||||| Sbjct 53248 CAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTCAACCACGA 53307 Query 8705 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGATGGTATCAAACAAA 8763 ||| || |||||||| | ||||| || | ||||||| | ||| | | || | | Sbjct 53308 GTCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAGATCTCGCGA-GCTGTCGCCGAGA 53366 Query 8764 TCGTCGC-GGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGG 8822 || |||| ||| | ||| | | | | | || ||| | | ||| || | || ||| Sbjct 53367 TC-TCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGTGATTGG 53425 Query 8823 GGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGAC 8882 |||||||| ||||| || || | ||||||| | | || || ||||| | ||| Sbjct 53426 GGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACACCCCCGAC 53485 Query 8883 GAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933 || | |||| |||||||||| ||||| ||| |||||| || ||||| ||| Sbjct 53486 GACTTTGTCCTCGCGACGGGTGAGACCCACCCCGTCAAAGAATTCGTCGAG 53536 >seq89 Length=907297 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || || || || |||||||| ||| || || || || ||||||| ||| | Sbjct 275562 TACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 275503 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 || |||||||| || || || ||| || ||| | ||| | || ||| |||| Sbjct 275502 ACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 275443 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 ||||| ||||| || || || | | | |||||| |||||||||||||||||||||| Sbjct 275442 AAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATTCTCTTCAACCACGAG 275383 Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 8744 || ||||| ||||||| ||||| || | |||||| Sbjct 275382 TCCCCCCGCCGTGGCCGCACCTTCGTCACGAGAAAGATC 275344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352577031960