Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq45 96.9 6e-15
>seq45
Length=1063883
Score = 96.9 bits (106), Expect = 6e-15
Identities = 341/525 (65%), Gaps = 6/525 (1%)
Strand=Plus/Minus
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|||||| || || ||| ||||| || | | || |||||||| || | | | | ||
Sbjct 39683 CTCCATGAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACGAGCGCGGACTTCCTC 39624
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283
| || ||||||| | |||||| || || | | |||||||||||||||||| |
Sbjct 39623 CTTGCCGTGGTTCTTGCGAAGGTCCAGG-AACTCGAAGACGTCGGCGTGCCACGGCTCGA 39565
Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343
| | || | || || || | |||||| ||||| ||||| || ||| | |
Sbjct 39564 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 39505
Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403
|||| | || || ||||| || || | ||||| | | || ||||||| | ||||
Sbjct 39504 TGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCATTCGTGCCGGCGATGT 39445
Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463
||||| || | | |||| |||| | || || || || | ||||| ||
Sbjct 39444 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 39385
Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522
| | |||||| ||||| || ||| |||||||||| | || ||||||||| || ||
Sbjct 39384 TGAGCGCGCACGTCTTG-AGTGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTG 39326
Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581
||||| | || || | |||| || || || || |||| ||||||||| ||
Sbjct 39325 ACCAGGAAACAGGACGAGAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 39267
Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATC 205641
||||||| ||||| |||| || | |||| | || || |||| ||| | ||
Sbjct 39266 GGCGTGGGTGAAGTAGCGCTCGGACATGAAGTTGTACGACTGCAAGACGCGCTCGATGTC 39207
Query 205642 GAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686
| ||||| || || | ||||| | ||||| | ||| || ||
Sbjct 39206 GTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGG 39162
Score = 89.7 bits (98), Expect = 8e-13
Identities = 160/226 (71%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897
|| ||| || ||||||| || || ||||| ||| || | | || ||||||||||
Sbjct 41134 CTGGTCGACGGTGAACTTGATCGCACCGACGGC-GGCGCGCGTGCGCAAGTAGTACATGC 41076
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC-GTTG 203956
| ||||| || || || ||| ||||| | |||||| || | || | || || |
Sbjct 41075 CCGTCTTCAGTCCTCGCTTCCAACCGTAGAAGTGCATCGACGTGAGCTGCGCCATTGTCG 41016
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015
|| ||| | | ||| ||||| || || || ||||| ||||| ||| || || || ||
Sbjct 41015 GGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCAATGAA-GGCACCTCGGTCGGC 40958
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
|| || || |||||||||||| ||||| | |||||| || ||||||
Sbjct 40957 GGACAGATCGATAATGGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 40912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153838296720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |