Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq45 96.9 6e-15 >seq45 Length=1063883 Score = 96.9 bits (106), Expect = 6e-15 Identities = 341/525 (65%), Gaps = 6/525 (1%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| || || ||| ||||| || | | || |||||||| || | | | | || Sbjct 39683 CTCCATGAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACGAGCGCGGACTTCCTC 39624 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | |||||| || || | | |||||||||||||||||| | Sbjct 39623 CTTGCCGTGGTTCTTGCGAAGGTCCAGG-AACTCGAAGACGTCGGCGTGCCACGGCTCGA 39565 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 39564 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 39505 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||| | || || ||||| || || | ||||| | | || ||||||| | |||| Sbjct 39504 TGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCATTCGTGCCGGCGATGT 39445 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| |||| | || || || || | ||||| || Sbjct 39444 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 39385 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||||| ||||| || ||| |||||||||| | || ||||||||| || || Sbjct 39384 TGAGCGCGCACGTCTTG-AGTGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTG 39326 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 ||||| | || || | |||| || || || || |||| ||||||||| || Sbjct 39325 ACCAGGAAACAGGACGAGAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 39267 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATC 205641 ||||||| ||||| |||| || | |||| | || || |||| ||| | || Sbjct 39266 GGCGTGGGTGAAGTAGCGCTCGGACATGAAGTTGTACGACTGCAAGACGCGCTCGATGTC 39207 Query 205642 GAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 | ||||| || || | ||||| | ||||| | ||| || || Sbjct 39206 GTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGG 39162 Score = 89.7 bits (98), Expect = 8e-13 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || ||||||| || || ||||| ||| || | | || |||||||||| Sbjct 41134 CTGGTCGACGGTGAACTTGATCGCACCGACGGC-GGCGCGCGTGCGCAAGTAGTACATGC 41076 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC-GTTG 203956 | ||||| || || || ||| ||||| | |||||| || | || | || || | Sbjct 41075 CCGTCTTCAGTCCTCGCTTCCAACCGTAGAAGTGCATCGACGTGAGCTGCGCCATTGTCG 41016 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 || ||| | | ||| ||||| || || || ||||| ||||| ||| || || || || Sbjct 41015 GGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCAATGAA-GGCACCTCGGTCGGC 40958 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 || || || |||||||||||| ||||| | |||||| || |||||| Sbjct 40957 GGACAGATCGATAATGGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 40912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153838296720