Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq89 176 5e-39 seq87 161 1e-34 seq44 147 2e-30 seq42 127 2e-24 seq47 125 7e-24 >seq89 Length=907297 Score = 176 bits (194), Expect = 5e-39 Identities = 173/223 (78%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 |||||| || ||||| |||||||| |||||| | ||| || || | ||| ||||| Sbjct 77894 GATTTGGAAACCGTAGAAGCACCGAGCCTCGGCGGACTGGACCTCACCGGAGAATCGCTC 77953 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||||| || || ||||||||||||||| |||||||||||||| || |||||| ||| Sbjct 77954 GACCAAGTTCTCATTGACGATGCCGTCGGACGCGGCGAAAAAGGCGAGGACGTGCGAGAT 78013 Query 133338 GAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| | |||||||| | || | | ||||||||| || |||||||||||| ||| Sbjct 78014 GAAGTAGCGCTCGTCGGGCTTGAGTTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTC 78073 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 || ||| ||| ||||||||||||| |||||||| || |||||| Sbjct 78074 CATCTCTTCGGCGGTCCAAAACGATGCCTCGGCCTTCTTGTAC 78116 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 ||||| | ||||||||||||| || | ||||||||| | || ||||| |||||| Sbjct 77283 GAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 77342 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGG 132991 ||| ||||| |||||||| | ||| || || |||||||| || |||| Sbjct 77343 GAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGG 77389 >seq87 Length=1238431 Score = 161 bits (178), Expect = 1e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || |||||||| ||||| || ||||| |||| |||||| | | Sbjct 436713 ATGCAAATCTTTGTCAAGACGCTCACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCA 436654 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || || | ||||| ||||| |||||| | ||||| Sbjct 436653 GACA-CGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCA 436595 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | |||||||| ||| |||| |||| ||||| ||| ||||||||| Sbjct 436594 ACAGCGTCTCATCTTTGCGGGCAAGCAGTTGGAGGACGGTCGCACGCTCTCCGACTACAA 436535 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| |||||||||| |||||||| ||| | ||||||| Sbjct 436534 CATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGG 436487 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || ||||| |||| |||||| || | Sbjct 678160 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 678101 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| ||||||| Sbjct 678100 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 678041 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || ||||| || |||| ||||| ||| |||||||||| Sbjct 678040 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 677981 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || |||||| |||||||||| |||||||||||| | ||||||| Sbjct 677980 ATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCGTCTCCGAGGCGG 677934 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || ||||| |||| |||||| || | Sbjct 678388 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 678329 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| |||||| ||||||| Sbjct 678328 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 678269 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || ||||| || |||| ||||| ||| |||||||||| Sbjct 678268 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 678209 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || |||||| |||||||||| |||||||| ||| | ||||||| Sbjct 678208 ATTCAGAAGGAATCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGG 678162 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || ||||| || ||||| |||| |||||| || | Sbjct 678616 ATGCAAATTTTCGTCAAGACTTTGACAGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 678557 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| |||||| ||||||| Sbjct 678556 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 678498 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| || || ||||| || |||| ||||| ||| ||||||||| Sbjct 678497 GCAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAA 678438 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || |||||| |||||||||| |||||||| ||| | ||||||| Sbjct 678437 CATTCAGAAGGAATCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGG 678390 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||||||||| ||||| || |||||| |||| |||||| | | Sbjct 436941 ATGCAAATCTTCGTTAAAACGCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCATCA 436882 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || || | ||||| ||||| |||||| | ||||| Sbjct 436881 GACA-CGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCA 436823 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || |||| ||||| ||| || ||||| Sbjct 436822 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCGGATTACAA 436763 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||||||||| |||||||| ||| Sbjct 436762 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGT 436726 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || || || |||| |||||| | | Sbjct 436485 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATTACGCTCGAGGTCGAGTCGTCA 436426 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || || | ||||| ||||| |||||| | ||||| Sbjct 436425 GACA-CGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCA 436367 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| ||||| ||||| || |||| ||||| ||| ||| ||||| Sbjct 436366 ACAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACGCTCTCCGATTACAA 436307 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| ||||||| ||||||||||| ||| Sbjct 436306 CATTCAGAAGGAGTCGACGCTTCATTTGGTGCTCCGT 436270 >seq44 Length=1311234 Score = 147 bits (162), Expect = 2e-30 Identities = 163/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 ||||||| ||||| || || ||||||||||| ||||||||| |||| |||||| | ||| Sbjct 308555 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 308614 Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| || | | | | |||| || |||| ||||| || || || ||| ||||||| Sbjct 308615 ACA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCCGACCAG 308673 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 308674 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAAC 308733 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| |||| || || |||||||| || Sbjct 308734 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCG 308768 >seq42 Length=296686 Score = 127 bits (140), Expect = 2e-24 Identities = 166/227 (73%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTC--TTGAGCGAAACGC 133275 ||| ||||| || |||||||||| ||||||| | |||||| || ||||| || | | Sbjct 243320 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGGACTGCACCTCGCTTGAG--AACCTC 243377 Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335 ||||||||||| || || || | || || |||||||||||||| |||||||| | Sbjct 243378 TCGACCAGATTCTCATTCACAACCCCATCCGAAGCGGCGAAAAAGGCGAGCACGTGGGCG 243437 Query 133336 ATGAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 || || | ||| |||| || ||| | | | | ||||||| | ||| ||| ||| Sbjct 243438 ATAAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGG 243497 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||| ||| ||| |||||| ||||| | ||||| ||||||||| Sbjct 243498 TCGATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACAT 243544 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| |||||| | | || || ||| ||| | || ||||| | ||| ||||| Sbjct 242739 CAAATGACTGAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGATATGAG 242798 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 |||||| ||||| | ||| ||||||||||| |||||||||||||||||||||| ||| Sbjct 242799 CTCGTTGGAGAAAGAGAGGCCAGGCATGAGGCCTCGTTTTTTGAGCCAAAATATGGAGGC 242858 Query 132996 GAA 132998 ||| Sbjct 242859 GAA 242861 >seq47 Length=302882 Score = 125 bits (138), Expect = 7e-24 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 |||||| ||||| || || || |||||||| || |||||| |||| |||||| | |||| Sbjct 149526 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 149585 Query 38306 CAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363 || || | | | | |||| || |||| ||||| || || || |||||| ||||| Sbjct 149586 CA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 149643 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 149644 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAAC 149703 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| |||| || || ||||| || || Sbjct 149704 ATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCG 149738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171943454080