Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq117 347 2e-90 seq68 174 2e-38 seq66 168 8e-37 seq27 95.1 2e-14 >seq117 Length=2006698 Score = 347 bits (384), Expect = 2e-90 Identities = 655/960 (68%), Gaps = 5/960 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || || || ||||| |||||||||||||| Sbjct 1569038 TCACCGGTGAGGATGGCGGCCTGGACAGCGGCACCATAGGCGACGGCCTCATCGGGGTTG 1568979 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 |||| || || | || || ||||| || || ||||| | | || || | || ||| Sbjct 1568978 ATCGACTTGTTGGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 1568919 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | ||||| || | || | || || ||||| || Sbjct 1568918 ATACGAGTAGAACCACCGACGAGGACGATCTCGTGGACGGAGGCCTTGTCAATCTTGGAA 1568859 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| |||||||||||| |||| ||| Sbjct 1568858 TCGCGGAGAACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 1568799 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || || ||||| ||||| || || || || | || || | | ||| || || Sbjct 1568798 TCGAAGCGGGCGCGGGTGATGGACGTGTAAAAGTCGATACCCTCAAACAGCGAGTCGATC 1568739 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || || || || || || | |||||| | |||||||| || || || || || || || Sbjct 1568738 TCGATAGTGGTCTGGGCGGCCGAAGAAAGGGTTCGCTTGGCACGTTCGCAGGCGGTGCGG 1568679 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | ||||||||| ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 1568678 AGACGACGAAGAGCACGGGCGTTGGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 1568619 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | |||| || || || ||||| |||||||| || || || Sbjct 1568618 GCGACGAAGTGGGTGACTAGTCGGTTGTCAAAGTCCTCACCTCCCAAGTGGGTGTCACCG 1568559 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || ||| | |||| |||||||| ||||| Sbjct 1568558 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAACAGGGAAACATCGAACGTT 1568499 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| | | | ||||| ||||| ||| Sbjct 1568498 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCCACGGTCTTCTTGTCGAGGCCG 1568439 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||| |||||||| ||| || || | || Sbjct 1568438 TAAGCGATGGCGGCGGCGGTGGGCTCGTTAATGATACGAAGGACGTTGAGACCCGAGATG 1568379 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 1568378 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGACA 1568319 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTG-GTAAG 7788 || |||| | ||| || | || || || | || ||| | || ||||| ||| | ||| Sbjct 1568318 ACGGCGTTGGAGACGGTCGTGCCCAGGTAGGCCTCGGCGGTCTCCTTCATCTTGAGCAAG 1568259 Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848 | ||| || || || || || | | ||||| || || || || | || || || Sbjct 1568258 -ATCATGGACGAGATTTCCTCGGGGGTGAACTGCTTTGTCTCGCCTCGGTACTCGACCTC 1568200 Query 7849 AATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 || ||||| || | | | || ||||| | | ||| | ||||| ||| Sbjct 1568199 GATGATGGGCTT---GGTTCCCTTGTCGACGACCTTGAAGGGCCAGTGCTTCATGTCGGA 1568143 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| | || | |||||| || || |||||||| |||||||| || ||||| Sbjct 1568142 CTGGACCTCGGGATCGGCCCACTTTCGGCCAATGAGACGCTTGGCATCAAAGACAGTGTT 1568083 >seq68 Length=3481606 Score = 174 bits (192), Expect = 2e-38 Identities = 529/808 (65%), Gaps = 17/808 (2%) Strand=Plus/Minus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| ||||| | || ||||| ||||| |||||||||||||| || Sbjct 1766152 ACCGGTCAAGACGGCGGCCTGGACGGCGGCACCGTAGGCGACGGCCTCATCGGGGTTGAT 1766093 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || |||| || | || || | || || | | || || || ||||| Sbjct 1766092 CGACTTGTTCAATTGTCGGCCACCGAAGAACTCGGAGACGAGCGACTGGATCTTGGGGAT 1766033 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | |||||| || | || || | |||| ||| | ||| Sbjct 1766032 ACGGGTCGAGCCACCGACGAGAACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 1765973 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 || || |||||||| || | | | | ||||| | | | |||| Sbjct 1765972 CTTGAGGACCTTCTCGACAGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 1765914 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || ||||| | || || | |||| || || | | | | ||| || | | Sbjct 1765913 CGAAGCGGGCACGCGAGATCGAGGCGGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 1765854 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| || || | ||| | Sbjct 1765853 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCAAGCAGATCGGA 1765794 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| ||||||||||||| |||| || || ||| | || | | |||||| | Sbjct 1765793 GACGACGGAGGGCACGCGGGTCTTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 1765734 Query 7431 CAGAGAAGTG-TCGAAGGAGTC-TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 ||| || || ||| | | | | || || || |||||||||||||| || || || Sbjct 1765733 TCTTGAAATGCTCCAAGAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 1765676 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 1765675 GGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 1765616 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGT----CTT-----TGTTCTT 7599 || || || || || || ||||| ||| | | || | | ||| || || Sbjct 1765615 TCCTCCTCCGAGATCGAAGATGAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 1765556 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCA 7658 | | |||||||| ||||| || || || || || || || || ||||| || ||| | || Sbjct 1765555 ACCAAGACCGTAGGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGCACA-TCCA 1765497 Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 ||| || || ||| | || || || |||| | || ||||| ||||||||||| || | Sbjct 1765496 AGCCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTAAAGTAAGCGG 1765437 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778 | || || ||||| || | | |||| | ||| ||||| | | || ||| | || || | Sbjct 1765436 GAACGGTGACGACGGCCTTCTTGACCTCCTTGCCGAGCTTGGTCTCGGCGGTCTCCTTGA 1765377 Query 7779 TTTTGGTAAGAACCATCGATGAAATCTC 7806 |||| || ||||| || || ||||| Sbjct 1765376 GCTTGGAGAGGACCATGGACGAGATCTC 1765349 >seq66 Length=2025303 Score = 168 bits (186), Expect = 8e-37 Identities = 234/327 (72%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 1752200 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 1752259 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| ||||| ||||| || || || || ||| | | || | | Sbjct 1752260 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCATAGACGATGATG 1752319 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 1752320 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCGGTGGGCTCG 1752376 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | ||| ||| ||| || || ||||| || | || || || |||||||||||| Sbjct 1752377 TTGACGACACGGAGAACGTTGAGACCGGCAATCGTGCCGGCGTCCTTGGTCGCTTGTCGT 1752436 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | |||||| |||||||| ||||| || ||||| |||| ||||| ||||| || || Sbjct 1752437 TGAGCATCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTGAGTGACCTTCTTGCCCAGG 1752496 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | ||| ||| | || ||||| ||| Sbjct 1752497 TAGGCTTCGGCGGTCTCCTTCATCTTG 1752523 Score = 105 bits (116), Expect = 8e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||||||||| || || || || || || || || | ||| || || || Sbjct 249862 TCGAGACCGTACGCGAGGGCAGCGGCAGTGGGCTCGTTGATGACACGGAGCACGTCAAGA 249803 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 ||||| || || | || || || ||||| ||||| ||||| ||||| |||||||| ||| Sbjct 249802 CCAGCGATCGTACCGGCGTCCTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 249743 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| ||| ||||| || || ||| | || ||||| Sbjct 249742 ACGGTGACGACGGCGTGCTTGACCGGCTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 249683 Query 7781 TTG 7783 ||| Sbjct 249682 TTG 249680 >seq27 Length=1194495 Score = 95.1 bits (104), Expect = 2e-14 Identities = 244/369 (66%), Gaps = 2/369 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || || || || || || ||| | || || || || || || || ||| || Sbjct 53126 TTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAATCCGAG 53185 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562 | || || || ||||| ||||| || || || || || || ||| || | ||| | Sbjct 53186 ACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGGTTTCTGGATC 53245 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | || || || | || || |||| ||||| |||||||| ||||| |||||||||| Sbjct 53246 GTCAAG-AACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTCAACCA 53304 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || ||| | || ||| | |||||| || | || || | | | |||||| | Sbjct 53305 CGAGTCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAGATCTCGCGAGCTGTCGCCGA 53364 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 ||| ||| |||| | || | ||||| || ||| | || || || || ||||| Sbjct 53365 GATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGTGATTG 53424 Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802 ||| || || ||||| ||||| | | ||||||| || | || ||||| | || || Sbjct 53425 GGGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACACCCCCGA 53484 Query 22803 AGATTTTGT 22811 || ||||| Sbjct 53485 CGACTTTGT 53493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131712335080