Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq45 143 3e-29 >seq45 Length=1063883 Score = 143 bits (158), Expect = 3e-29 Identities = 434/659 (66%), Gaps = 10/659 (2%) Strand=Plus/Minus Query 110375 CCAAG-TTCTTCTGATTCGATTTGGAGTT-GCATGCATCCTTATAGAGCATGTATGGGGT 110432 ||||| ||||| || |||||||| ||| ||| || ||||| ||||||||| | ||| | Sbjct 39925 CCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA-GCGTCCTTGTAGAGCATGAACGGGTT 39867 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTG 110491 || ||||| ||| | | |||||| || | ||| | | | ||| |||||| || Sbjct 39866 GCCGGTTTCGACCTGGGCTTCGAGAATCGCATACCAAAGCTTTTGCG-CGGGGATCGTCT 39808 Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551 || ||| | || |||| ||||| || | ||||| | ||| || | ||||| | Sbjct 39807 TCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGACGCGAAACTCTTCGCCGTAGA 39748 Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611 | || || || || | | |||| |||||||||| ||| | || | |||| | Sbjct 39747 CTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCGGCCTCGA 39688 Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCT 110671 | | || |||||| || || |||||||| | || |||| || ||||| || | | Sbjct 39687 CACGCTCCATGAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACGAGCGCGGACTT 39628 Query 110672 CTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTT 110731 | || | || ||||| ||| || |||| || || | || || | |||||| || | Sbjct 39627 CCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCCACGGCT 39568 Query 110732 CGAGATAGACAGCGATGGATCCCTTACGACGAC--CCGCCT-GGTTAACATAGCGTGCTG 110788 |||| |||| |||| || ||| ||| || ||| ||| || ||||| || | Sbjct 39567 CGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGG 39508 Query 110789 TGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAA 110848 || ||| |||| | |||||| || | || || | || | ||||| || || | Sbjct 39507 TGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCATTCGTGCCGGCGA 39448 Query 110849 TTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTAC 110908 | ||| | || || |||| |||||| || ||| |||||||| || ||| Sbjct 39447 TGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGG 39388 Query 110909 TAATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTG 110967 || | || ||| ||| ||||||| | || || || ||||||||||| |||| | Sbjct 39387 AGATGAGCGCGCACGTCT-TGAGTGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATC 39329 Query 110968 GCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 | | || || || || || | ||| || |||||||||| || |||||||| || || Sbjct 39328 GTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGG 39270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974991378600