Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq45 167 3e-36
seq27 161 1e-34
seq89 107 2e-18
>seq45
Length=1063883
Score = 167 bits (184), Expect = 3e-36
Identities = 553/851 (65%), Gaps = 17/851 (2%)
Strand=Plus/Minus
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522
||||| || ||||| |||||||| || ||| ||| | | |||||| | |||||
Sbjct 40012 GCGATCGAGGCCAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCA 39953
Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTT-GCA 106581
|| || | ||| || ||| ||||| || | ||||||||||| |||||||| |||
Sbjct 39952 GTGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA 39893
Query 106582 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTT 106641
|| ||||||||||||||| | || | || || || ||| | | |||||| || |
Sbjct 39892 -GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATA 39834
Query 106642 CCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 106700
||| | | | || || || | | ||||| || |||||| ||||| || |
Sbjct 39833 CCAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGA 39775
Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 106760
| | | | |||||| || || | ||| ||| || || || | | | || ||||
Sbjct 39774 ACAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGA 39715
Query 106761 AAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820
| || | ||| | || | |||| || |||| |||||| || || |||||||| || |
Sbjct 39714 AGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAG 39655
Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880
| |||||||| | | || | || || | || ||||| || | || ||||
Sbjct 39654 CAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 39595
Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC- 106939
|||| | || || |||||||| ||||| || |||| |||| | ||| |||||
Sbjct 39594 ACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCT 39538
Query 106940 -----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 106994
||| |||| | || |||||||| ||| ||| | || || ||||| || | |
Sbjct 39537 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 39478
Query 106995 TACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATG 107052
| || | || | ||||| || || ||| || ||| | || | | | ||
Sbjct 39477 TGCCGTTCGAGTAGCCATTCGTGCCGGCGATGTAGGAG--CCGGTCGCGCGGATGTTGTG 39420
Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 107112
|||| || || ||||| || || ||| ||||| |||| ||| | | || || |
Sbjct 39419 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTC 39360
Query 107113 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172
||||| || | || || || ||||| | | || ||||| || || | ||||||
Sbjct 39359 GTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGG 39300
Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACAT 107232
|| || || || |||||||| || || | ||||| |||| | | ||||||
Sbjct 39299 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACAT 39240
Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292
|| ||| | || |||||| || ||||| | ||||||||||||| ||| |||||
Sbjct 39239 GAAGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACG 39180
Query 107293 CATAAACATGT 107303
||| | |||||
Sbjct 39179 CATGAGCATGT 39169
>seq27
Length=1194495
Score = 161 bits (178), Expect = 1e-34
Identities = 278/396 (70%), Gaps = 6/396 (2%)
Strand=Plus/Plus
Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958
|||| |||| |||||||| |||| ||| ||| ||| ||||| |||| | || |||
Sbjct 53122 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAATC 53181
Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATT 7017
|||| ||| ||||||||||| || ||| ||||||||| | ||| | | ||| |
Sbjct 53182 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGG-TTTCT 53240
Query 7018 GGCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCA 7077
|| ||||||| || ||||||||||| |||| ||| || ||| ||| ||| | ||||
Sbjct 53241 GGATCGTCAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTCA 53300
Query 7078 ACCATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGAT-TACCGAGGGTAT 7135
|||| || || ||| | || ||| ||| ||| ||||| | |||||| | ||| | | |
Sbjct 53301 ACCACGAGTCCCCGCGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATCTCGCGA-GCTGT 53358
Query 7136 CAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAG 7195
| | ||| | ||| || |||| | | | | | || ||||| | || || |
Sbjct 53359 CGCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCG 53418
Query 7196 AGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGA 7255
|||||||| |||||| ||||| || || | ||||||| | ||||| || |||||
Sbjct 53419 TGATTGGGGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACAC 53478
Query 7256 AGCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 7291
||||||| | ||| | || ||||||||||||||
Sbjct 53479 CCCCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 53514
>seq89
Length=907297
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958
|||| |||| || ||||| |||| ||| ||| || ||||| ||| | || ||
Sbjct 275569 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 275510
Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018
|||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||
Sbjct 275509 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 275450
Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078
| ||||||| || ||||||||||| |||| ||| |||||| ||| || ||||||||
Sbjct 275449 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATTCTCTTCAA 275390
Query 7079 CCATGAATCACC 7090
||| || || ||
Sbjct 275389 CCACGAGTCCCC 275378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979789657880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |