Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq45 167 3e-36 seq27 161 1e-34 seq89 107 2e-18 >seq45 Length=1063883 Score = 167 bits (184), Expect = 3e-36 Identities = 553/851 (65%), Gaps = 17/851 (2%) Strand=Plus/Minus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 ||||| || ||||| |||||||| || ||| ||| | | |||||| | ||||| Sbjct 40012 GCGATCGAGGCCAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCA 39953 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTT-GCA 106581 || || | ||| || ||| ||||| || | ||||||||||| |||||||| ||| Sbjct 39952 GTGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA 39893 Query 106582 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTT 106641 || ||||||||||||||| | || | || || || ||| | | |||||| || | Sbjct 39892 -GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATA 39834 Query 106642 CCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 106700 ||| | | | || || || | | ||||| || |||||| ||||| || | Sbjct 39833 CCAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGA 39775 Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 106760 | | | | |||||| || || | ||| ||| || || || | | | || |||| Sbjct 39774 ACAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGA 39715 Query 106761 AAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 106820 | || | ||| | || | |||| || |||| |||||| || || |||||||| || | Sbjct 39714 AGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAG 39655 Query 106821 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880 | |||||||| | | || | || || | || ||||| || | || |||| Sbjct 39654 CAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 39595 Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC- 106939 |||| | || || |||||||| ||||| || |||| |||| | ||| ||||| Sbjct 39594 ACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCT 39538 Query 106940 -----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 106994 ||| |||| | || |||||||| ||| ||| | || || ||||| || | | Sbjct 39537 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 39478 Query 106995 TACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATG 107052 | || | || | ||||| || || ||| || ||| | || | | | || Sbjct 39477 TGCCGTTCGAGTAGCCATTCGTGCCGGCGATGTAGGAG--CCGGTCGCGCGGATGTTGTG 39420 Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 107112 |||| || || ||||| || || ||| ||||| |||| ||| | | || || | Sbjct 39419 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTC 39360 Query 107113 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172 ||||| || | || || || ||||| | | || ||||| || || | |||||| Sbjct 39359 GTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGG 39300 Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACAT 107232 || || || || |||||||| || || | ||||| |||| | | |||||| Sbjct 39299 GTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACAT 39240 Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292 || ||| | || |||||| || ||||| | ||||||||||||| ||| ||||| Sbjct 39239 GAAGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACG 39180 Query 107293 CATAAACATGT 107303 ||| | ||||| Sbjct 39179 CATGAGCATGT 39169 >seq27 Length=1194495 Score = 161 bits (178), Expect = 1e-34 Identities = 278/396 (70%), Gaps = 6/396 (2%) Strand=Plus/Plus Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958 |||| |||| |||||||| |||| ||| ||| ||| ||||| |||| | || ||| Sbjct 53122 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAATC 53181 Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATT 7017 |||| ||| ||||||||||| || ||| ||||||||| | ||| | | ||| | Sbjct 53182 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGG-TTTCT 53240 Query 7018 GGCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCA 7077 || ||||||| || ||||||||||| |||| ||| || ||| ||| ||| | |||| Sbjct 53241 GGATCGTCAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTCA 53300 Query 7078 ACCATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGAT-TACCGAGGGTAT 7135 |||| || || ||| | || ||| ||| ||| ||||| | |||||| | ||| | | | Sbjct 53301 ACCACGAGTCCCCGCGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATCTCGCGA-GCTGT 53358 Query 7136 CAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAG 7195 | | ||| | ||| || |||| | | | | | || ||||| | || || | Sbjct 53359 CGCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCG 53418 Query 7196 AGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGA 7255 |||||||| |||||| ||||| || || | ||||||| | ||||| || ||||| Sbjct 53419 TGATTGGGGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACAC 53478 Query 7256 AGCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 7291 ||||||| | ||| | || |||||||||||||| Sbjct 53479 CCCCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 53514 >seq89 Length=907297 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958 |||| |||| || ||||| |||| ||| ||| || ||||| ||| | || || Sbjct 275569 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 275510 Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018 |||| ||| ||||||||||| |||||| |||||||||| | ||| | || || Sbjct 275509 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 275450 Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078 | ||||||| || ||||||||||| |||| ||| |||||| ||| || |||||||| Sbjct 275449 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATTCTCTTCAA 275390 Query 7079 CCATGAATCACC 7090 ||| || || || Sbjct 275389 CCACGAGTCCCC 275378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979789657880