Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq47 98.7 6e-16 seq44 96.9 2e-15 seq87 95.1 8e-15 >seq47 Length=302882 Score = 98.7 bits (108), Expect = 6e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| ||||||| || | || |||| || Sbjct 149732 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCG 149673 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || |||||||||||| |||| | || |||||||| Sbjct 149672 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 149613 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| || || || Sbjct 149612 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 149553 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGC 34979 ||||| |||||||| || ||||| ||| Sbjct 149552 CCCGTAAGAGTCTTGACGAAGATTTGC 149526 >seq44 Length=1311234 Score = 96.9 bits (106), Expect = 2e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| ||||||| || | || |||| || Sbjct 308762 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCG 308703 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || ||||||||||| | || | || |||||||| Sbjct 308702 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTGG 308643 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| ||||| || Sbjct 308642 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 308583 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCA 34980 |||||||| ||||| || ||||| |||| Sbjct 308582 CCCGTGAGGGTCTTGACGAAGATTTGCA 308555 >seq87 Length=1238431 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||||||||| ||||| || || | || | || ||| Sbjct 436505 ACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCC 436564 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || || ||||| || || || || |||||| | || | ||||||||||| | Sbjct 436565 AACTGCTTGCCCGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGA 436624 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| || || || || Sbjct 436625 ATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTCTTG 436684 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| |||||||| |||||| Sbjct 436685 CCAGTGAGCGTCTTGACAAAGATTTGCATA 436714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633057963336