Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq89 170 2e-37 >seq89 Length=907297 Score = 170 bits (188), Expect = 2e-37 Identities = 172/224 (77%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 30160 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30219 |||||||| || ||||||||||||||||||||||| |||||||||| || ||||||||| Sbjct 229924 TACTCTGCGCCAAAATGCCTCCACTGGAACCCGTAAACCGGTCCCAAATCCCCCTCTTCC 229983 Query 30220 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279 || ||| | || || |||||||||||| | ||| || || || | ||||| ||||| Sbjct 229984 CTATGCGCCAACCCAACCTTGTCCAAAAATTGTCTCGATCCATTCCCATCCCAAATCTTG 230043 Query 30280 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30339 |||||||| ||||| | | ||| |||| || || || | |||||||| || || ||| Sbjct 230044 ACCCCCTTGTCGGACAACAATTTCGAGTCGGTCGATCCGCGAACGAACCAAAGGAGTTCC 230103 Query 30340 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 || | || | | | ||||||| |||||||||| | ||||| Sbjct 230104 TCGATGATGCCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGG 230147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616917736301