Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq45 165 2e-35
seq42 109 1e-18
>seq45
Length=1063883
Score = 165 bits (182), Expect = 2e-35
Identities = 782/1232 (63%), Gaps = 34/1232 (3%)
Strand=Plus/Minus
Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
|||| ||||| |||| || | || |||| ||||||||| || || |||| | |||||
Sbjct 40300 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 40241
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
||||| ||||| || || ||| |||||| || | |||| | || || ||
Sbjct 40240 AGCTTGCGCGCCTCGGGTGAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGA 40181
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || |||||||||||||| | ||| | | ||| || || | || ||| |
Sbjct 40180 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGC-CTCGATGAC 40122
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
|||||| ||||| ||| ||||| ||| | |||| | | | || ||| ||| |
Sbjct 40121 GGGGTAGTAGTTGACGTCAATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 40062
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489
| ||| | || |||| |||| | |||| || | || ||| |||| ||||
Sbjct 40061 GTGCAGCTTCT------TGAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAAAGCGA 40009
Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549
| ||||| |||||||||||| ||| | | | | |||||| ||||| || ||||
Sbjct 40008 TCGAGGCCAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCAGTGC 39949
Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609
| ||||| | ||| ||||| ||||||| ||||| || ||| ||| |||| |
Sbjct 39948 AAAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCAGCGT 39889
Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669
|||||||||||||| | ||| ||||| || | ||||| | || ||| ||| |
Sbjct 39888 CCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATACCAAA 39829
Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGT 213726
| | || || | | | || | ||| | | || ||||| | |||
Sbjct 39828 GCTTTTGCGCGGGGATCGTCTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTCTCGA 39775
Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783
| | || || || | ||| |||| || || || || || | ||||| |
Sbjct 39774 ACAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAGGCCGGG---GGCTTCGGCGGGGC 39718
Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843
| | |||| |||||| ||| | | ||| | || |||||| || || || | ||| |
Sbjct 39717 AGAAGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGA 39658
Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903
| || ||| || || | | | || ||| || ||| ||||| || || |
Sbjct 39657 GAGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCA 39598
Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960
| || || |||| ||| |||||||||||||| | |||||| || ||||| || | ||
Sbjct 39597 GGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 39538
Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020
| ||||| || ||||| || | || ||||| ||| || || | ||| || |
Sbjct 39537 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 39478
Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080
||||| || | || || || || || || || ||||||| || | | |||| |
Sbjct 39477 TGCCGTTCGAGTAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGA 39418
Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140
|| | || || ||||||||| ||||||||| | ||||| | | | || ||
Sbjct 39417 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGT 39358
Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200
|||||| | || || || | | | | || ||| ||| ||||||||| ||
Sbjct 39357 AGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGT 39298
Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGA 214260
| || || | |||||| ||||| || ||| ||| | | | | || | ||
Sbjct 39297 GAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGA 39238
Query 214261 GCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCA 214320
|||| | || || ||| ||||||||| |||||| | ||| | ||
Sbjct 39237 AGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCA 39178
Query 214321 TCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGGAGC 214377
| ||||||||||| || | || || | ||| | | || |||| ||||||||
Sbjct 39177 TGAGCATGTGCTGCGGGCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGC 39121
Query 214378 GCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409
|||| || |||||||| ||||||||| ||||
Sbjct 39120 GCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAG 39089
>seq42
Length=296686
Score = 109 bits (120), Expect = 1e-18
Identities = 165/234 (71%), Gaps = 3/234 (1%)
Strand=Plus/Plus
Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513
|||||| ||||| || ||| ||| ||||| |||||| || | ||||| |||||
Sbjct 243320 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGGACTGCACCTCGCTTGAGAACCTCTC 243379
Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573
| |||||||||||| || | |||||| ||||| || || ||||| || || || |
Sbjct 243380 GACCAGATTCTCATTCACAACCCCATCCGAAGCGGCGAAAAAGGCGAGCACGTGGGCGAT 243439
Query 48574 GAAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTC 48630
|| | ||| |||| || | |||| | |||| | || | ||| ||||| |||||
Sbjct 243440 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTC 243499
Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
| ||||| | | ||| |||||||| | |||| |||||||||| |||| ||
Sbjct 243500 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAGAT 243553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531204750080
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