Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq45 165 2e-35 seq42 109 1e-18 >seq45 Length=1063883 Score = 165 bits (182), Expect = 2e-35 Identities = 782/1232 (63%), Gaps = 34/1232 (3%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | || |||| ||||||||| || || |||| | ||||| Sbjct 40300 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 40241 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || ||| |||||| || | |||| | || || || Sbjct 40240 AGCTTGCGCGCCTCGGGTGAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGA 40181 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 || || || |||||||||||||| | ||| | | ||| || || | || ||| | Sbjct 40180 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGC-CTCGATGAC 40122 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 |||||| ||||| ||| ||||| ||| | |||| | | | || ||| ||| | Sbjct 40121 GGGGTAGTAGTTGACGTCAATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 40062 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489 | ||| | || |||| |||| | |||| || | || ||| |||| |||| Sbjct 40061 GTGCAGCTTCT------TGAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAAAGCGA 40009 Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549 | ||||| |||||||||||| ||| | | | | |||||| ||||| || |||| Sbjct 40008 TCGAGGCCAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCAGTGC 39949 Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609 | ||||| | ||| ||||| ||||||| ||||| || ||| ||| |||| | Sbjct 39948 AAAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCAGCGT 39889 Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669 |||||||||||||| | ||| ||||| || | ||||| | || ||| ||| | Sbjct 39888 CCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATACCAAA 39829 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGT 213726 | | || || | | | || | ||| | | || ||||| | ||| Sbjct 39828 GCTTTTGCGCGGGGATCGTCTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTCTCGA 39775 Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783 | | || || || | ||| |||| || || || || || | ||||| | Sbjct 39774 ACAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAGGCCGGG---GGCTTCGGCGGGGC 39718 Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843 | | |||| |||||| ||| | | ||| | || |||||| || || || | ||| | Sbjct 39717 AGAAGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGA 39658 Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903 | || ||| || || | | | || ||| || ||| ||||| || || | Sbjct 39657 GAGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCA 39598 Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960 | || || |||| ||| |||||||||||||| | |||||| || ||||| || | || Sbjct 39597 GGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 39538 Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020 | ||||| || ||||| || | || ||||| ||| || || | ||| || | Sbjct 39537 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGA 39478 Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080 ||||| || | || || || || || || || ||||||| || | | |||| | Sbjct 39477 TGCCGTTCGAGTAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGA 39418 Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCA 214140 || | || || ||||||||| ||||||||| | ||||| | | | || || Sbjct 39417 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGT 39358 Query 214141 TGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200 |||||| | || || || | | | | || ||| ||| ||||||||| || Sbjct 39357 AGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGT 39298 Query 214201 TGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGA 214260 | || || | |||||| ||||| || ||| ||| | | | | || | || Sbjct 39297 GAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGA 39238 Query 214261 GCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCA 214320 |||| | || || ||| ||||||||| |||||| | ||| | || Sbjct 39237 AGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCA 39178 Query 214321 TCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGGAGC 214377 | ||||||||||| || | || || | ||| | | || |||| |||||||| Sbjct 39177 TGAGCATGTGCTGCGGGCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGC 39121 Query 214378 GCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409 |||| || |||||||| ||||||||| |||| Sbjct 39120 GCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAG 39089 >seq42 Length=296686 Score = 109 bits (120), Expect = 1e-18 Identities = 165/234 (71%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513 |||||| ||||| || ||| ||| ||||| |||||| || | ||||| ||||| Sbjct 243320 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGGACTGCACCTCGCTTGAGAACCTCTC 243379 Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573 | |||||||||||| || | |||||| ||||| || || ||||| || || || | Sbjct 243380 GACCAGATTCTCATTCACAACCCCATCCGAAGCGGCGAAAAAGGCGAGCACGTGGGCGAT 243439 Query 48574 GAAATGGCGCTCGTTGTGGGTGAG---AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTC 48630 || | ||| |||| || | |||| | |||| | || | ||| ||||| ||||| Sbjct 243440 AAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTC 243499 Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 | ||||| | | ||| |||||||| | |||| |||||||||| |||| || Sbjct 243500 GATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAGAT 243553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531204750080