Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq45 241 2e-57
seq66 116 5e-20
seq87 105 8e-17
seq42 89.7 6e-12
>seq45
Length=1063883
Score = 241 bits (266), Expect = 2e-57
Identities = 338/471 (72%), Gaps = 19/471 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||||||||| |||| ||| |||| ||||||||||| |||| |||||| ||
Sbjct 39526 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 39467
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| ||| || ||||| || | ||||| ||||| ||||| | ||||| | || |||
Sbjct 39466 TAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 39407
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 39406 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAGATGCCTTCA 39347
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
||||| ||| ||||||| || || || || |||||| |||||||| | ||| |||
Sbjct 39346 ATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTCCG 39287
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA-GGT 1630364
|||||||||||||| |||| || |||||| | || |||||| || ||| |
Sbjct 39286 GCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAAGTTGTACGAC 39227
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
|| || |||||| || | |||| | || | | ||||| ||||||
Sbjct 39226 TGCAAG-ACGCGC------------TCGATGTCGTGA---CCGTGGATGCCGACGGCGAC 39183
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCG-CGCACCTTGGTCAGGTAGG 1630483
||||||||||||| ||| || || ||| |||| |||| || | | || |||||
Sbjct 39182 ACGCATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAG-CAAGTAGG 39124
Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534
| || | ||| ||| |||||||||| || | |||||||||||||
Sbjct 39123 AGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGT 39073
Score = 138 bits (152), Expect = 1e-26
Identities = 297/450 (66%), Gaps = 2/450 (0%)
Strand=Plus/Minus
Query 1628152 GGCGACGAAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTC 1628211
|||| ||| ||| || ||| || ||||| ||||| | |||| | |||| || ||||||
Sbjct 39976 GGCGCCGAGTACTCGATGATTTCAGTGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTC 39917
Query 1628212 TGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCG 1628271
| ||||| | | ||| | |||||||||| ||||||| | || |||||| |||
Sbjct 39916 TTTTGGTTCGATTTTTTGTTTGCAGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCG 39857
Query 1628272 ATCTGCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCA-CGACAGTCCGCGCGCG 1628330
| ||| || ||| || || |||| | || ||||||| | || | || |||||
Sbjct 39856 ACCTGGGCTTCGAGAATCGCATACCAAAGCTTTTGCGCGGGGATCGTCT-TCTTGGCGCG 39798
Query 1628331 GCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAG 1628390
||||| ||| | |||||||| ||||| ||
Sbjct 39797 GCCCTCCTTTTCGTATTTCTCGAACAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAG 39738
Query 1628391 GCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCAT 1628450
|||||| || |||| || || ||||| | ||||||||| ||| | | | || |||
Sbjct 39737 GCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCAT 39678
Query 1628451 AAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCC 1628510
||||| || |||| || || | ||||| || || || ||| |||||||||||
Sbjct 39677 GAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCC 39618
Query 1628511 GTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCA 1628570
||||||||| ||||| || | |||| | |||||||||||||||||| ||||||
Sbjct 39617 GTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGAT 39558
Query 1628571 GGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
|| ||||| || |||||| ||| ||
Sbjct 39557 CGCGAAGGCTCCGGGACGCTTGTTGCCACC 39528
Score = 109 bits (120), Expect = 7e-18
Identities = 171/242 (71%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040
|||||||||||| |||| ||| || || |||||| | ||||||| |||||||||||
Sbjct 41134 CTGGTCGACGGTGAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATGCC 41075
Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGC 1627100
||||| || || || ||| ||||| |||||||||||||| || | ||||
Sbjct 41074 CGTCTTCAGTCCTCGCTTCCAACCGTAGAAGTGCATCGACGTGAGCTGCGCCATTGTCGG 41015
Query 1627101 G-TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCG 1627159
| ||| | ||| | ||||||||| || |||||| | ||| | || ||||| |
Sbjct 41014 GCTCGAC-AAGTGGATGTTGAGCGATTGCGACTGGTCAATGAAGGCACCTCGGTCGGCGG 40956
Query 1627160 CCATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGT 1627219
|| ||||| || | | | | |||||| ||||||||| ||||||||||||| |
Sbjct 40955 ACAGATCGATAATGGTCTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTTGAGAT 40896
Query 1627220 CG 1627221
||
Sbjct 40895 CG 40894
>seq66
Length=2025303
Score = 116 bits (128), Expect = 5e-20
Identities = 135/181 (75%), Gaps = 6/181 (3%)
Strand=Plus/Plus
Query 1254365 GATCAGGCGCACGGCGGTCTGGATCTCGCG---CGTGCCGATCGTGTTGCGCTTGTTCGA 1254421
||||| || || | ||||||||||||||| || | | ||| ||||| |||| |
Sbjct 1194452 GATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGCGGTTGT---A 1194508
Query 1254422 GTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1254481
|| ||| || || ||||||||| ||||||| |||| ||||| ||||| ||||||||
Sbjct 1194509 GTTCGCGAGCTTGCACGCCTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAACGAGTT 1194568
Query 1254482 CATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1254541
| || | ||||| |||||| ||||| || |||||||| |||||||| | ||||||
Sbjct 1194569 GAGGATCAGCATCGCCTTGTTCGAGATACCGGTATCGGGGTGGACCTGCTTCAACACCTT 1194628
Query 1254542 G 1254542
|
Sbjct 1194629 G 1194629
Score = 116 bits (128), Expect = 5e-20
Identities = 135/181 (75%), Gaps = 6/181 (3%)
Strand=Plus/Minus
Query 1254365 GATCAGGCGCACGGCGGTCTGGATCTCGCG---CGTGCCGATCGTGTTGCGCTTGTTCGA 1254421
||||| || || | ||||||||||||||| || | | ||| ||||| |||| |
Sbjct 1242456 GATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGCGGTTGT---A 1242400
Query 1254422 GTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1254481
|| ||| || || ||||||||| ||||||| |||| ||||| ||||| ||||||||
Sbjct 1242399 GTTCGCGAGCTTGCACGCCTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAACGAGTT 1242340
Query 1254482 CATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1254541
| || | ||||| |||||| ||||| || |||||||| |||||||| | ||||||
Sbjct 1242339 GAGGATCAGCATCGCCTTGTTCGAGATACCGGTATCGGGGTGGACCTGCTTCAACACCTT 1242280
Query 1254542 G 1254542
|
Sbjct 1242279 G 1242279
Score = 109 bits (120), Expect = 7e-18
Identities = 147/201 (73%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCG---CGTGCCGA 1254402
||| ||| || || | | ||||| || || ||||||||||||||||| || | |
Sbjct 1530454 TGGACAGCTCTCCAGGGAGGATCAATCGGACCGCGGTCTGGATCTCGCGCGACGAGATGG 1530513
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
||| ||||| |||| ||| ||| || | ||||||||| ||||||| || | |
Sbjct 1530514 TCGACTTGCGGTTGT---AGTTCGCGAGCTTGGACGCCTCGGTGACGATGCGTTCAAAGA 1530570
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGA-CATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521
|||| ||||| |||||||| | || || ||||| |||||| ||||| ||| |||||||
Sbjct 1530571 TGTCATTGACGAACGAGTTGA-GAATGAGCATCGCCTTGTTCGAGATACCCGTGTCGGGG 1530629
Query 1254522 TGCACCTGCTTGAGCACCTTG 1254542
|| || ||||| | ||| |||
Sbjct 1530630 TGGACTTGCTTCAACACTTTG 1530650
>seq87
Length=1238431
Score = 105 bits (116), Expect = 8e-17
Identities = 104/132 (79%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| || ||||| |||||||| ||||||| ||| || ||||| ||||| |||
Sbjct 927765 ATCGGTGGTACGGTCACGTGCGTCATCCGCAACGCTCCGTTCGGTCTCGGAGAGCCCGTG 927824
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || ||| | ||||||||||||||||||||||| || ||||||||
Sbjct 927825 -TTCGACAAGCTGGAAGCCCTCTTGGCCCACGCCATGCTGTCGATCCCCGCGACCAAGGG 927883
Query 19172 ATTCGAGATTGG 19183
|||||||||||
Sbjct 927884 TTTCGAGATTGG 927895
>seq42
Length=296686
Score = 89.7 bits (98), Expect = 6e-12
Identities = 161/232 (69%), Gaps = 5/232 (2%)
Strand=Plus/Plus
Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTC-CTTCATGAACCGGC 869711
|||||| || || |||||| |||| |||| || || ||||| ||| | |||||
Sbjct 243320 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGGACTGCACCTCGCTTGA-GAACCTCT 243378
Query 869712 CGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGA 869771
|| |||| ||||| ||| | || || ||||||||||| || || ||||| ||
Sbjct 243379 CGACCAGATTCTCATTCACAACCCCATCCGAAGCGGCGAAAAAGGCGAGCACGTGGGCGA 243438
Query 869772 TAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGCGCTGAGGT 869828
|||||| ||| ||||||| | ||||| ||||| | | |||| || |||||
Sbjct 243439 TAAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGT 243498
Query 869829 CCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880
| | ||| ||||||| ||| | || || | ||| | ||||||||| ||||
Sbjct 243499 CGATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCA 243550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107127957138429
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |