Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq45 192 9e-43 seq66 132 8e-25 seq89 114 2e-19 seq42 114 2e-19 seq87 95.1 2e-13 >seq45 Length=1063883 Score = 192 bits (212), Expect = 9e-43 Identities = 198/259 (76%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 |||||||| |||||||| |||| ||| |||| ||||||||||| || | |||||| || Sbjct 39526 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 39467 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | ||| || ||||| || | ||||| ||| | ||||| | ||||| | || ||| Sbjct 39466 TAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 39407 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||| | ||||||||||||||||||| | || || || ||||||||||| || Sbjct 39406 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAGATGCCTTCA 39347 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 ||||| ||| ||||||| | ||| || || |||||| |||||| | | ||| ||| Sbjct 39346 ATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTCCG 39287 Query 2073781 GCATTGAAGAGCGTGGGCG 2073799 || ||||||||||| |||| Sbjct 39286 GCGTTGAAGAGCGTCGGCG 39268 Score = 149 bits (164), Expect = 1e-29 Identities = 301/450 (67%), Gaps = 2/450 (0%) Strand=Plus/Minus Query 2071564 GGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTC 2071623 |||| ||| ||| || || || ||||| ||||| | |||| | | ||||| |||||| Sbjct 39976 GGCGCCGAGTACTCGATGATTTCAGTGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTC 39917 Query 2071624 TGCTGGTT-GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTC 2071682 | ||||| | | | | ||| | |||||||||| |||||| | || || || || Sbjct 39916 TTTTGGTTCGATTTTTTGTTTG-CAGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTC 39858 Query 2071683 GATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCG 2071742 || ||| || || || || |||||| | ||||||| | || || | ||||| Sbjct 39857 GACCTGGGCTTCGAGAATCGCATACCAAAGCTTTTGCGCGGGGATCGTCTTCTTGGCGCG 39798 Query 2071743 GCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAG 2071802 ||||| | | | || ||| | |||||| | ||||| || Sbjct 39797 GCCCTCCTTTTCGTATTTCTCGAACAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAG 39738 Query 2071803 GCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCAT 2071862 |||||| || |||| ||||| ||||| | |||||||||| | | | | || || ||| Sbjct 39737 GCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCAT 39678 Query 2071863 AAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCC 2071922 || || ||| |||| || | | |||||||| || || ||| ||||||||||| Sbjct 39677 GAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCC 39618 Query 2071923 GTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCA 2071982 ||||||||| ||||| || | |||| || |||||||||||||||||| |||||| Sbjct 39617 GTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGAT 39558 Query 2071983 GGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 || ||||| || |||||| ||| || Sbjct 39557 CGCGAAGGCTCCGGGACGCTTGTTGCCACC 39528 Score = 107 bits (118), Expect = 3e-17 Identities = 175/245 (71%), Gaps = 14/245 (6%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 ||||||||||| |||| ||| || | |||| | || ||||||| ||||||||||| Sbjct 41133 TGGTCGACGGTGAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATGCCC 41074 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCAT--TCG 2069368 ||||| || || || ||| ||||| |||||||||||||| | || ||| ||| Sbjct 41073 GTCTTCAGTCCTCGCTTCCAACCGTAGAAGTGCATCGACGTGA--GCTGCGCCATTGTCG 41016 Query 2069369 GG-ACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427 || || || ||| || ||||||||| || |||||| | ||| | |||||||| Sbjct 41015 GGCTCGACA-AGTGGATGTTGAGCGATTGCGACTGGTCAATGAAGGCACCTCGGTCGGCG 40957 Query 2069428 GCCATGTCG---ATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTT 2069483 | || ||| ||||| | ||| || | |||||| ||||||||| | | |||||| Sbjct 40956 GACAGATCGATAATGGT----CTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTT 40901 Query 2069484 GAGAT 2069488 ||||| Sbjct 40900 GAGAT 40896 Score = 93.3 bits (102), Expect = 7e-13 Identities = 141/196 (72%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 2070051 CGCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCCGGCGCTCT 2070109 ||| || |||||||| ||||| ||||| ||| |||||| ||||| ||| | Sbjct 40277 CGCGGCGTGGTAGATGGTCTCGAAGATC-TGCTTGTTGAGCTTGCGCGCCTCGGGTGAAT 40219 Query 2070110 CCCACGGCAGGTCCATCATGGCA--AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCAT 2070167 | |||||| ||| | | || ||||||||||| || || ||||| |||| ||| || Sbjct 40218 CGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGAT 40161 Query 2070168 CGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227 || |||||||| | ||| |||| | | |||||| || ||||||| ||||| ||| || Sbjct 40160 GGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGGTAGTAGTTGACGTCAAT 40101 Query 2070228 CACGCGGTTGAGGTTG 2070243 | |||||| | |||| Sbjct 40100 GATGCGGTTCAAGTTG 40085 >seq66 Length=2025303 Score = 132 bits (146), Expect = 8e-25 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 1485482 CGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCA 1485541 || |||| || ||||| |||| |||||| ||| || || || | | ||||| || | Sbjct 1194403 CGACCTTTGTGCCCTCCGAGATGGCGTGTTTGGATAGCTCTCCAGGGAGGATCAATCGGA 1194462 Query 1485542 CGGCGGTCTGGATCTCGCG---GGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGC 1485598 | | ||||||||||||||| | | | ||| ||||| ||| |||| |||| || Sbjct 1194463 CCGAGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGCGGTTG-TAGTTCGCG--AGCT 1194519 Query 1485599 GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACA 1485658 || ||||||||| ||||||| |||| ||||| ||||| |||||||| | |||| || Sbjct 1194520 TGCACGCCTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAACGAGTTGAGGATCAGCA 1194579 Query 1485659 TCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||| ||||| ||||| || |||||||| |||||||| | ||||||| Sbjct 1194580 TCGCCTTGTTCGAGATACCGGTATCGGGGTGGACCTGCTTCAACACCTTG 1194629 Score = 132 bits (146), Expect = 8e-25 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1485482 CGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCA 1485541 || |||| || ||||| |||| |||||| ||| || || || | | ||||| || | Sbjct 1242505 CGACCTTTGTGCCCTCCGAGATGGCGTGTTTGGATAGCTCTCCAGGGAGGATCAATCGGA 1242446 Query 1485542 CGGCGGTCTGGATCTCGCG---GGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGC 1485598 | | ||||||||||||||| | | | ||| ||||| ||| |||| |||| || Sbjct 1242445 CCGAGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGCGGTTG-TAGTTCGCG--AGCT 1242389 Query 1485599 GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACA 1485658 || ||||||||| ||||||| |||| ||||| ||||| |||||||| | |||| || Sbjct 1242388 TGCACGCCTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAACGAGTTGAGGATCAGCA 1242329 Query 1485659 TCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||| ||||| ||||| || |||||||| |||||||| | ||||||| Sbjct 1242328 TCGCCTTGTTCGAGATACCGGTATCGGGGTGGACCTGCTTCAACACCTTG 1242279 Score = 118 bits (130), Expect = 2e-20 Identities = 164/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544 |||| || || || |||| |||||| ||| ||| || || | | ||||| || || | Sbjct 1530427 CCTTTGTGCCTTCCGAGATGGCGTGTTTGGACAGCTCTCCAGGGAGGATCAATCGGACCG 1530486 Query 1485545 CGGTCTGGATCTCGCG---GGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601 |||||||||||||||| | | | ||| ||||| ||| |||| |||| || | Sbjct 1530487 CGGTCTGGATCTCGCGCGACGAGATGGTCGACTTGCGGTTG-TAGTTCGCG--AGCTTGG 1530543 Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661 ||||||||| ||||||| || | ||||| ||||| |||||||| | || ||||| Sbjct 1530544 ACGCCTCGGTGACGATGCGTTCAAAGATGTCATTGACGAACGAGTTGAGAATGAGCATCG 1530603 Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| ||| ||||||||| || ||||| | ||| ||| Sbjct 1530604 CCTTGTTCGAGATACCCGTGTCGGGGTGGACTTGCTTCAACACTTTG 1530650 >seq89 Length=907297 Score = 114 bits (126), Expect = 2e-19 Identities = 152/208 (73%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGG-GTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGC 796199 || |||| ||||||| | ||| ||||||| ||| || || ||| ||||||| Sbjct 77910 AAGCACCGAGCCTCGGCGGACT-GGACCTCACCGGAGAATCGCTCGACCAAGTTCTCATT 77968 Query 796200 CACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC 796259 |||||||||||| |||||||||||||||||||||||| ||| |||| |||||||| Sbjct 77969 GACGATGCCGTCGGACGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCGTC 78028 Query 796260 GTCGCTGAG---CGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGT 796316 | |||| | |||||| | | |||| | | ||| | ||| |||||||| Sbjct 78029 GGGCTTGAGTTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTCCATCTCTTCGGCGGT 78088 Query 796317 CCAAAAGGAGGCCTCGGCCTTTTTGTAC 796344 |||||| || ||||||||||| |||||| Sbjct 78089 CCAAAACGATGCCTCGGCCTTCTTGTAC 78116 >seq42 Length=296686 Score = 114 bits (126), Expect = 2e-19 Identities = 162/222 (73%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 796140 AAAACACCTGGCCTCGG-GTACTTGGACCTC-CTTCATGAAGCGGCCGGCCAGGTTCTCA 796197 ||| ||||| ||||||| | ||| | ||||| ||| | ||| | || |||| |||||| Sbjct 243335 AAAGCACCTCGCCTCGGCGGACT-GCACCTCGCTTGA-GAACCTCTCGACCAGATTCTCA 243392 Query 796198 GCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCG 796257 ||| | || || ||||||||||||||||| ||||| |||||||| || ||| Sbjct 243393 TTCACAACCCCATCCGAAGCGGCGAAAAAGGCGAGCACGTGGGCGATAAAGTAGCGTTCG 243452 Query 796258 TCGTCGCTGAGCGAGAC---CCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCG 796314 |||| | ||||| | ||||| | |||| ||||||||||| ||| |||||| Sbjct 243453 TCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTCGATCTCTTCGGCG 243512 Query 796315 GTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 | ||||||||| || | ||| | ||||||||| |||| ||| Sbjct 243513 GACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAGATC 243554 >seq87 Length=1238431 Score = 95.1 bits (104), Expect = 2e-13 Identities = 199/294 (68%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 2019147 GACGTCGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGC 2019206 |||||||| || | ||||||| | |||| ||||| || || || | || Sbjct 843997 GACGTCGTACGCAACCGCATCAAGGCTTTCGCTCAGAAAAAGGTCACACTCCCATCGGGT 843938 Query 2019207 CGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCC 2019266 ||||||||| | |||||||||| || ||||||| | || ||| ||||| || || Sbjct 843937 CGCCACAAGCTCGTCATCCTCGACGAAGCCGACTCGATGACCCCGGGAGCCCAACAAGCG 843878 Query 2019267 CTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACG 2019326 |||||| ||| ||||||| | | ||||||| || || || || | || |||||| | Sbjct 843877 CTCCGAAGGACGATGGAAATCTTCTCCAACACCACTCGCTTCGCCTTTGCGTGCAACCAG 843818 Query 2019327 TCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTC 2019386 | | ||||||| | | ||||| || |||||||||||| | | || | ||| Sbjct 843817 AGCAACAAGATCATCGAGCCGATTCAGAGTCGATGCGCCATCTTGAGGTACTCGAGGCTC 843758 Query 2019387 ACCGACGCCCAGATCGCCG-CGCGTCTGCGCGAGATTATCGACGCCGAAAAGGT 2019439 || || ||| || | || | |||| ||| |||||| ||| |||||||| Sbjct 843757 ACTGATGCCGAG-TTGCTGAGGCGTTTGCTGGAGATTTGCGAGATTGAAAAGGT 843705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916231826685143