Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq44 120 2e-22
seq47 118 7e-22
seq87 107 1e-18
>seq44
Length=1311234
Score = 120 bits (132), Expect = 2e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| |||||| || ||||| ||||||| || |||| ||||
Sbjct 308765 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 308706
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || ||||||||||| | || | || ||||||||
Sbjct 308705 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCT 308646
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | |||||| || | ||| ||||||
Sbjct 308645 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 308586
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976
|| |||||||||||||| || ||||| ||||
Sbjct 308585 TTGCCCGTGAGGGTCTTGACGAAGATTTGCA 308555
>seq47
Length=302882
Score = 118 bits (130), Expect = 7e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| |||||| || ||||| ||||||| || |||| ||||
Sbjct 149735 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 149676
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || |||||||||||| |||| | || ||||||||
Sbjct 149675 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 149616
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | |||||| || | ||| || |||
Sbjct 149615 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 149556
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| ||||| || ||||| || ||||| ||| ||
Sbjct 149555 TTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 149523
>seq87
Length=1238431
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| || || |||| | || |||| ||||| || || ||
Sbjct 436522 CTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCCAACTGCTTGCCCGCAAA 436581
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904
||| || || || |||||| | || | ||||||||||| || | | || || ||||||
Sbjct 436582 GATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 436640
Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
| |||| || | |||||| || | || || ||||| || ||||| ||||| |
Sbjct 436641 TGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTGAGCGTCTTGA 436700
Query 34965 CAAAGATCTGCAT 34977
||||||| |||||
Sbjct 436701 CAAAGATTTGCAT 436713
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || |||| || |||| | || || || ||||| || |||||
Sbjct 436750 CTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 436809
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904
||||| ||| ||||||||| | || | ||||||||||| || | | || || ||||||
Sbjct 436810 GATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 436868
Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
| |||| || | |||||| || | ||| || ||||| || ||||| || || |
Sbjct 436869 TGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGCGTTTTAA 436928
Query 34965 CAAAGATCTGCAT 34977
| ||||| |||||
Sbjct 436929 CGAAGATTTGCAT 436941
Score = 98.7 bits (108), Expect = 6e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| || || || || |||| | || || || ||||| || |||||
Sbjct 436294 CTCCTTCTGAATGTTGTAATCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 436353
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904
||||| ||| || |||||| | || | ||||||||||| || | | || || ||||||
Sbjct 436354 GATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 436412
Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
| |||| || | |||||| || | || || ||||| || || || ||||| |
Sbjct 436413 TGTCGATCGTGTCTGACGACTCGACCTCGAGCGTAATCGTCTTGCCGGTCAGCGTCTTGA 436472
Query 34965 CAAAGATCTGCAT 34977
| || || |||||
Sbjct 436473 CGAAAATTTGCAT 436485
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||| ||||| || || |||| | || || || ||||| || ||||||
Sbjct 677970 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 678029
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||| |||||||| | || | ||||||||||| | || || |||||
Sbjct 678030 ATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 678089
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || || |||||| || | || || ||||| || || || ||||| ||
Sbjct 678090 TCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACG 678149
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 678150 AAAATTTGCAT 678160
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||| ||||| || || |||| | || || || ||||| || ||||||
Sbjct 678198 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 678257
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||| |||||||| | || | ||||||||||| | || || |||||
Sbjct 678258 ATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 678317
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || || |||||| || | || || ||||| || || || ||||| ||
Sbjct 678318 TCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACG 678377
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 678378 AAAATTTGCAT 678388
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||| ||||| || || |||| | || || || ||||| || ||||||
Sbjct 678426 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 678485
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| ||| |||||||| | || | ||||||||||| | || || ||||||
Sbjct 678486 ATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 678545
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || || |||||| || | || || ||||| || || | ||||| ||
Sbjct 678546 TCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCTGTCAAAGTCTTGACG 678605
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 678606 AAAATTTGCAT 678616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692256194803
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |