Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq44 120 2e-22 seq47 118 7e-22 seq87 107 1e-18 >seq44 Length=1311234 Score = 120 bits (132), Expect = 2e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||| || ||||| ||||||| || |||| |||| Sbjct 308765 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 308706 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || ||||||||||| | || | || |||||||| Sbjct 308705 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCT 308646 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| |||||| Sbjct 308645 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 308586 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 || |||||||||||||| || ||||| |||| Sbjct 308585 TTGCCCGTGAGGGTCTTGACGAAGATTTGCA 308555 >seq47 Length=302882 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| |||||| || ||||| ||||||| || |||| |||| Sbjct 149735 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 149676 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || |||||||||||| |||| | || |||||||| Sbjct 149675 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 149616 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| || ||| Sbjct 149615 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 149556 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| || ||||| || ||||| ||| || Sbjct 149555 TTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 149523 >seq87 Length=1238431 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || |||| | || |||| ||||| || || || Sbjct 436522 CTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCCAACTGCTTGCCCGCAAA 436581 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||| || || || |||||| | || | ||||||||||| || | | || || |||||| Sbjct 436582 GATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 436640 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | || || ||||| || ||||| ||||| | Sbjct 436641 TGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTGAGCGTCTTGA 436700 Query 34965 CAAAGATCTGCAT 34977 ||||||| ||||| Sbjct 436701 CAAAGATTTGCAT 436713 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || |||| || |||| | || || || ||||| || ||||| Sbjct 436750 CTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 436809 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||||| ||| ||||||||| | || | ||||||||||| || | | || || |||||| Sbjct 436810 GATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 436868 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | ||| || ||||| || ||||| || || | Sbjct 436869 TGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGCGTTTTAA 436928 Query 34965 CAAAGATCTGCAT 34977 | ||||| ||||| Sbjct 436929 CGAAGATTTGCAT 436941 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || || || || |||| | || || || ||||| || ||||| Sbjct 436294 CTCCTTCTGAATGTTGTAATCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 436353 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||||| ||| || |||||| | || | ||||||||||| || | | || || |||||| Sbjct 436354 GATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 436412 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | || || ||||| || || || ||||| | Sbjct 436413 TGTCGATCGTGTCTGACGACTCGACCTCGAGCGTAATCGTCTTGCCGGTCAGCGTCTTGA 436472 Query 34965 CAAAGATCTGCAT 34977 | || || ||||| Sbjct 436473 CGAAAATTTGCAT 436485 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || || |||| | || || || ||||| || |||||| Sbjct 677970 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 678029 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||| |||||||| | || | ||||||||||| | || || ||||| Sbjct 678030 ATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 678089 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || || |||||| || | || || ||||| || || || ||||| || Sbjct 678090 TCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACG 678149 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 678150 AAAATTTGCAT 678160 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || || |||| | || || || ||||| || |||||| Sbjct 678198 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 678257 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||| |||||||| | || | ||||||||||| | || || ||||| Sbjct 678258 ATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 678317 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || || |||||| || | || || ||||| || || || ||||| || Sbjct 678318 TCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACG 678377 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 678378 AAAATTTGCAT 678388 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || || |||| | || || || ||||| || |||||| Sbjct 678426 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 678485 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||| |||||||| | || | ||||||||||| | || || |||||| Sbjct 678486 ATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 678545 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || || |||||| || | || || ||||| || || | ||||| || Sbjct 678546 TCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCTGTCAAAGTCTTGACG 678605 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 678606 AAAATTTGCAT 678616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692256194803