Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq45 271 7e-68 seq87 134 1e-26 seq44 131 2e-25 seq47 127 2e-24 seq89 98.7 1e-15 >seq45 Length=1063883 Score = 271 bits (300), Expect = 7e-68 Identities = 836/1262 (66%), Gaps = 47/1262 (4%) Strand=Plus/Minus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| || ||| |||| Sbjct 40301 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTT 40242 Query 148592 GAGCA-GCGCCGCCGACTCGCTT---TCGTACGGCATACGC--AGCCGCACAAACGCGTC 148645 |||| |||| | |||| | ||| ||||||| ||| || | || |||||||| Sbjct 40241 GAGCTTGCGC----GCCTCGGGTGAATCGAACGGCAT-CGCCAAGGC-CATGAACGCGTC 40188 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 ||| || || || || || | ||| ||||| ||||| | ||||||| |||| || Sbjct 40187 GGCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGC-CT 40129 Query 148706 CTC-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTT 148763 | || || |||| |||| ||| ||||| || |||| ||| | || ||||| Sbjct 40128 CGATGACGGGGTAGTAGTTGACGTCAATGATGCGGTTCAAG-TTGAAAGCGACGACCTTG 40070 Query 148764 GTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGG 148821 | | ||||| | || |||||| | | | |||| | |||| || | Sbjct 40069 ACGACCTCGTGCAGCTTCTTGAAGTCGTACACGCCGTTCTTGATGAAGCTCGG--CAAAG 40012 Query 148822 CGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGG 148881 |||| ||||| | ||||| ||||| ||| ||||| || |||||| | ||| || | Sbjct 40011 CGATCGAGGCCAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCAG 39952 Query 148882 CGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT-GCAC 148940 ||| || || | |||||| ||| | ||||||||| || || |||| ||| Sbjct 39951 TGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA- 39893 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCG- 148999 ||||||||||| |||||| |||| ||| ||||| ||||| | ||| | ||| || Sbjct 39892 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGA----GAATCGC 39837 Query 149000 ATGC---AGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGT 149056 || | || | |||||| | | || || | ||| ||||||| |||||| Sbjct 39836 ATACCAAAGCTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTC 39777 Query 149057 ATACA-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG- 149114 ||| | ||| ||| | ||||||||| |||| ||| |||||| ||| ||||| Sbjct 39776 GAACAAGACGCGA-AACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGG-CTTCGGCGGGG 39719 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 || | ||| | ||| ||||| | || | || |||| ||| || |||||||| | |||| Sbjct 39718 CAGAAGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAG 39659 Query 149175 AGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC---GCCCATGTTGCGGCGCAGG 149231 || || | | ||| || || || || | |||| | ||| ||| ||| ||| Sbjct 39658 AGAGCAAAGAAGAGATCACGAGC---GCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGG 39602 Query 149232 TTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTG 149291 | || | ||| | ||| |||||||||||||| | ||| | ||||| || || Sbjct 39601 TCCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGA 39542 Query 149292 CGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGT 149348 ||| ||||| || |||||||||| |||| | ||||||| | || || | ||| || Sbjct 39541 CGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGG 39482 Query 149349 TCAATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTT 149407 | ||||| | | ||| ||| || || | ||| |||| ||| || | || Sbjct 39481 ACGATGCCGTTCG-AGTAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTT 39423 Query 149408 GTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCG 149466 ||| | | | | ||||| || ||| || ||| |||||| |||||| ||| ||| | Sbjct 39422 GTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC-TTGAGTG 39364 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | ||||||||| || || ||| |||||| || | ||| || || || | | | Sbjct 39363 TGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCT 39304 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGC 149586 |||| | |||| ||||| ||| | || || |||||| || || || || | Sbjct 39303 GCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGG 39244 Query 149587 TCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGA 149646 ||| | | |||||||| | ||||| || ||||| | || |||||||| | ||||| Sbjct 39243 ACATGAAGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGA 39184 Query 149647 CGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGC 149706 | ||||| ||||| |||||||| || || || || ||| | || ||||||||| Sbjct 39183 CACGCATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGG 39124 Query 149707 CGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGG 149766 | || || |||||| |||||||||| |||||| | || |||||| ||| | || || Sbjct 39123 AGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGG 39064 Query 149767 CG 149768 || Sbjct 39063 CG 39062 >seq87 Length=1238431 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| | |||| ||| ||||||||||||||| || Sbjct 677964 GTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACC-GTCCTCGAGCTGCTTACC 678022 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||||||||| ||||| |||||||| |||||| ||| Sbjct 678023 AGCGAAGATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 678082 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 678083 GACATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGT 678142 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 678143 CTTGACGAAAATTTGCAT 678160 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| | |||| ||| ||||||||||||||| || Sbjct 678192 GTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACC-GTCCTCGAGCTGCTTACC 678250 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | |||||||||||||| || ||||| |||||||| |||||| ||| Sbjct 678251 AGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 678310 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 678311 GACATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGT 678370 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 678371 CTTGACGAAAATTTGCAT 678388 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| | |||| ||| ||||||||||||||| || Sbjct 678420 GTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACC-GTCCTCGAGCTGCTTACC 678478 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | |||||||||||||| || ||||| |||||||| |||||| ||| Sbjct 678479 AGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 678538 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| |||| ||| Sbjct 678539 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCTGTCAAAGT 678598 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 678599 CTTGACGAAAATTTGCAT 678616 Score = 123 bits (136), Expect = 2e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| ||||| || ||||||||| | |||| ||| ||||||||| Sbjct 436280 AAATGAAGCGTCGACTCCTTCTGAATGTTGTAATCGGAGAGCGTGCGACC-GTCCTCGAG 436338 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || | ||||| ||||| || || ||||| |||||||| || Sbjct 436339 CTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGAAT 436398 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||| | | ||| || |||| || | || ||||| Sbjct 436399 CTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTAATCGTCTTGCC 436458 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| || || |||||||| ||||| Sbjct 436459 GGTCAGCGTCTTGACGAAAATTTGCAT 436485 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || |||||||| | | |||| |||||||||||||||||| Sbjct 436745 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCA 436804 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||||||||||| || || ||||| |||||||| ||||| |||| Sbjct 436805 GCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTG 436864 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| | | ||| || |||| ||||| || ||||| || || ||| Sbjct 436865 ACGTTGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGCGTT 436924 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 436925 TTAACGAAGATTTGCAT 436941 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | |||| ||| |||||| | ||||||||| Sbjct 436517 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACC-GTCCTCCAACTGCTTGCC 436575 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||| ||||| || || ||||| |||||||| ||||| ||| Sbjct 436576 CGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTT 436635 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 436636 GACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTGAGCGT 436695 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 436696 CTTGACAAAGATTTGCAT 436713 >seq44 Length=1311234 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| || | | ||| | | | |||||||| Sbjct 308759 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCA-TCCTCGAG 308701 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || ||||||||||| ||||||||||||||||| ||| Sbjct 308700 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTGGAT 308641 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| ||| ||||| Sbjct 308640 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCC 308581 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCA 133659 || || || || ||||| || |||| Sbjct 308580 CGTGAGGGTCTTGACGAAGATTTGCA 308555 >seq47 Length=302882 Score = 127 bits (140), Expect = 2e-24 Identities = 155/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| || | | ||| | | | |||||||| Sbjct 149729 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCA-TCCTCGAG 149671 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 149670 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 149611 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 149610 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 149551 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGG 133662 || ||||| || ||||| || ||| ||| Sbjct 149550 CGTAAGAGTCTTGACGAAGATTTGCCTGG 149522 >seq89 Length=907297 Score = 98.7 bits (108), Expect = 1e-15 Identities = 182/258 (71%), Gaps = 13/258 (5%) Strand=Plus/Plus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC-GCCGACGTGAAA 120552 ||| ||||||| || || |||||||| | ||| || | || || ||| || || Sbjct 77147 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAA-CCGCAGGGAAGAGCCTCGGTCAAG 77205 Query 120553 AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCAT 120611 || |||||||| || || || |||||||||| ||| ||| | | ||| | ||| | Sbjct 77206 AATTCCTTCTCGATCTCGACGGCCTCCTTGATGATGAGCGCG---ACGGTGTCGGGG--T 77260 Query 120612 CTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 || |||| | || | | || || ||| |||| |||||||| ||||| |||||||| Sbjct 77261 GAGGTCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTC 77318 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 77319 GTCACGCGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAG 77378 Query 120729 GTAGAATATGGCGGCAAA 120746 |||| |||| ||||| Sbjct 77379 CCAGAAGATGGAAGCAAA 77396 Score = 96.9 bits (106), Expect = 3e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 120364 ACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAAC 120423 || || ||||||||||||||||| |||||||| | |||||| | |||||||| ||||| Sbjct 76938 ACACGCTTCTCAAAAAAGTTTGTCTTGCCCTCGAGCGAAATCATATTCATAAAGTCGAAA 76997 Query 120424 GGGTTGCTC-GCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTAC 120482 ||||| ||| ||||| || || || | |||||| || | || |||||| || || Sbjct 76998 GGGTT-CTCGGCGTTCCAGACCTTGGGGTTGCCCAAGGCGACCAACAATCGGTCGGCGAC 77056 Query 120483 AAACTCAATGTA 120494 |||||| ||||| Sbjct 77057 AAACTCGATGTA 77068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419972141880