Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq87 131 2e-25
>seq87
Length=1238431
Score = 131 bits (144), Expect = 2e-25
Identities = 157/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | ||| ||||| ||||||||||| |||| | || || |||| ||
Sbjct 678407 CACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTC 678466
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||||| || || ||||| ||||||||||| | |||| || ||||||||||
Sbjct 678467 GAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 678526
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705
|||||| ||| | |||| | | |||||| || || ||||| | ||||||||| |
Sbjct 678527 GATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCT 678585
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || |||||||| || || || || |||||
Sbjct 678586 TGCCTGTCAAAGTCTTGACGAAAATTTGCAT 678616
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
|| |||||| || | ||| ||||| ||||||||||| |||| | || || ||||
Sbjct 677948 CAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTC 678007
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
|| ||||||||||| || || ||||| ||||||||||| | ||||| || |||||||||
Sbjct 678008 CTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 678067
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| |||||| ||| | | | | | |||||| || || ||||| | |||||||||
Sbjct 678068 CTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGT 678127
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || |||| || || || || || |||||
Sbjct 678128 CTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 678160
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | ||| ||||| ||||||||||| |||| | || || |||| ||
Sbjct 678179 CACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTC 678238
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||||| || || ||||| ||||||||||| | |||| || ||||||||||
Sbjct 678239 GAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 678298
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
|||||| ||| | | | | | |||||| || || ||||| | ||||||||| ||
Sbjct 678299 GATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTT 678358
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| |||| || || || || || |||||
Sbjct 678359 GCCGGTCAGCGTCTTGACGAAAATTTGCAT 678388
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||||||| | ||| |||||| ||||||||||||||||
Sbjct 436259 CCACCACGAAGACGGAGCACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAATCGGAG 436318
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| || |||||||| || || || ||||| ||||| ||||| | |||
Sbjct 436319 AGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGA 436378
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || ||||||||| ||||| ||| | |||| | | |||||| ||| || ||
Sbjct 436379 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCGATCGTGTCTGACGACTCGAC 436437
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||| ||||| || || |||| || || || || || |||||
Sbjct 436438 CTCGAGCGTAATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 436485
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | ||| |||||| ||||||||||| |||| | || || |||| ||
Sbjct 436504 CACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTC 436563
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|| |||||| |||||||| || | ||||| ||||| | |||| || |||||||||
Sbjct 436564 CAACTGCTTGCCCGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTG 436623
Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705
||||| ||| | |||| | | |||||| ||| || ||||| | ||||||||| |
Sbjct 436624 AATCTTGGTCTTGA-CGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTCT 436682
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || || | || || ||||| || |||||
Sbjct 436683 TGCCAGTGAGCGTCTTGACAAAGATTTGCAT 436713
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | ||| |||||| || ||||||||||| ||
Sbjct 436715 CCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 436774
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| || |||||||| || || || ||||| ||||||||||| | |||
Sbjct 436775 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 436834
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || ||||||||| ||||| ||| | |||| | | |||||| || || ||
Sbjct 436835 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCGATCGTGTCTGATGACTCGAC 436893
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | |||||||| || || || | ||||| || || || |||||
Sbjct 436894 CTCGAGGGTGATCGTCTTGCCAGTGAGCGTTTTAACGAAGATTTGCAT 436941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792828015960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |