Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq27 105 1e-17 >seq27 Length=1194495 Score = 105 bits (116), Expect = 1e-17 Identities = 261/390 (67%), Gaps = 6/390 (2%) Strand=Plus/Plus Query 161306 GTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAG 161365 ||||| ||||||| || || ||| ||||||||||| ||| ||||| || || Sbjct 53120 GTCCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAA 53179 Query 161366 AAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATAT 161425 || || || || |||||||| || || || || || || || || | || || | Sbjct 53180 TCCGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGGTTTC 53239 Query 161426 TGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTC 161485 ||||| || ||||||||| | ||| || | ||| |||| | | ||||| | ||| Sbjct 53240 TGGATCGTCAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTC 53299 Query 161486 AACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTA 161545 ||||| ||||| || || || ||| || ||||| || | ||||| || | | || Sbjct 53300 AACCACGAGTCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAGAT--CTCGCGAGCTG 53357 Query 161546 TC-CCG-TAT-TAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAACTCAAGA 161602 || ||| || | | | || | |||||| || || ||||| || || | | | | Sbjct 53358 TCGCCGAGATCTCGCTC-GGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAG 53416 Query 161603 CGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGAA 161662 || |||||||| || || ||||| || |||| |||||| ||||| | || || || Sbjct 53417 CGTGATTGGGGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGAC 53476 Query 161663 ACTCCTGATGACTATGTGATTGCCACAGGT 161692 || || || |||| ||| | || || ||| Sbjct 53477 ACCCCCGACGACTTTGTCCTCGCGACGGGT 53506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729928349995560