Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq27 105 1e-17
>seq27
Length=1194495
Score = 105 bits (116), Expect = 1e-17
Identities = 261/390 (67%), Gaps = 6/390 (2%)
Strand=Plus/Plus
Query 161306 GTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAG 161365
||||| ||||||| || || ||| ||||||||||| ||| ||||| || ||
Sbjct 53120 GTCCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAA 53179
Query 161366 AAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATAT 161425
|| || || || |||||||| || || || || || || || || | || || |
Sbjct 53180 TCCGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGGTTTC 53239
Query 161426 TGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTC 161485
||||| || ||||||||| | ||| || | ||| |||| | | ||||| | |||
Sbjct 53240 TGGATCGTCAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTC 53299
Query 161486 AACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTA 161545
||||| ||||| || || || ||| || ||||| || | ||||| || | | ||
Sbjct 53300 AACCACGAGTCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAGAT--CTCGCGAGCTG 53357
Query 161546 TC-CCG-TAT-TAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAACTCAAGA 161602
|| ||| || | | | || | |||||| || || ||||| || || | | | |
Sbjct 53358 TCGCCGAGATCTCGCTC-GGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAG 53416
Query 161603 CGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGAA 161662
|| |||||||| || || ||||| || |||| |||||| ||||| | || || ||
Sbjct 53417 CGTGATTGGGGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGAC 53476
Query 161663 ACTCCTGATGACTATGTGATTGCCACAGGT 161692
|| || || |||| ||| | || || |||
Sbjct 53477 ACCCCCGACGACTTTGTCCTCGCGACGGGT 53506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729928349995560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |