Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12-
23] 137 sequences; 28,906,851 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq45 214 2e-50
seq44 136 5e-27
>seq45
Length=1063883
Score = 214 bits (236), Expect = 2e-50
Identities = 562/848 (66%), Gaps = 11/848 (1%)
Strand=Plus/Minus
Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769
||||| || |||| || || || | | ||| ||| | | |||||| || |||||
Sbjct 40012 GCGATCGAGGCCAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCA 39953
Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829
||||| | ||| || ||| || ||||| | ||||||||| || || ||| ||||
Sbjct 39952 GTGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA 39893
Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889
|| |||||||| |||||| | || | || || || |||| | |||||| || | |
Sbjct 39892 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATAC 39833
Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948
|| | | | || || || | || ||||| || ||||| | ||||| || | |
Sbjct 39832 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 39774
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
| | | ||||||||| || | | || ||| || || || | | ||||||||
Sbjct 39773 CAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 39714
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
||| | ||| | || | |||| || |||| ||||||||| || || |||||||| ||
Sbjct 39713 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAGC 39654
Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
|||||||||| ||| ||| |||| || | || || || || | |||| ||
Sbjct 39653 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 39594
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA-- 119186
|| | || || ||||||||||| || ||||| | ||||| | || |||
Sbjct 39593 CTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 39534
Query 119187 -CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245
||| | |||| || || | ||| ||| ||| | ||||| ||||| || | ||| ||
Sbjct 39533 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCC 39474
Query 119246 ATCGGATTGGCCATTTGTCCCC-CGAA-TACGAGACTTATTGGCTCTGACATCGTGGATG 119303
| || | |||||| || || ||| || ||| | | || | || | |||||||
Sbjct 39473 GTTCGAGTAGCCATTCGTGCCGGCGATGTAGGAGCCGG--TCGCGCGGATGTTGTGGATG 39416
Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363
|| ||| ||||| || || ||| ||||| |||||||| | |||| || |||||
Sbjct 39415 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAG 39356
Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423
|| || || ||||| || |||| | | || ||||| ||| ||| | || ||
Sbjct 39355 ATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGA 39296
Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTG 119483
|| || || ||||||||||| || || | |||||| |||| | | |||||| |
Sbjct 39295 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAAG 39236
Query 119484 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542
| ||| | || ||||||| || | ||||| | ||||| || |||| | ||| |||||
Sbjct 39235 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACACGCAT 39177
Query 119543 AAACATGT 119550
| |||||
Sbjct 39176 GAGCATGT 39169
>seq44
Length=1311234
Score = 136 bits (150), Expect = 5e-27
Identities = 341/506 (67%), Gaps = 23/506 (5%)
Strand=Plus/Plus
Query 179683 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 179738
||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||||
Sbjct 1114685 CCCTTGGTTGCCTTGACGATGGGGGTGATGAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 1114743
Query 179739 GAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATC 179798
| ||| || | |||| | || | |||| ||| |||||||||||||| || |||||
Sbjct 1114744 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTAATGTGCGATCCATC 1114803
Query 179799 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 179858
|| |||| ||| | ||| ||||| ||| || || || ||| | || || ||
Sbjct 1114804 GTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCAGTGTA 1114863
Query 179859 ATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 179918
| ||||| || || ||||||||||||| ||||| | ||||| ||| || | |||
Sbjct 1114864 GACTTTACCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 1114919
Query 179919 -GAGTTGCGCC---ACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACA 179974
||| | ||| | | || || || || || |||| || || | ||||| |
Sbjct 1114920 CGAGGAGGGCCTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAGGGGAAGA 1114979
Query 179975 CACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 180034
|||| |||| || ||||| || |||| ||||| | || ||||| | ||| |||||||
Sbjct 1114980 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGACACGGCGAGCGCCTTGGCGGAAT 1115039
Query 180035 CACCCTCCGTCACGATGAGCGTACACTT--TCCAGATTGTGCCGTCCCTGCCTTGTTCGC 180092
| || || |||| ||||||||| ||||| || | | | ||| || || | ||||||
Sbjct 1115040 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTGGTTCGC 1115097
Query 180093 GTCGTCCAACTTGGGAATACCAGTAATTTTGGA---CTTACGAGCGCCATCTGTCTTCTT 180149
|| || | |||| || ||| || || || |||| | || || ||||||||
Sbjct 1115098 ATCCTCGAGCTTGACAAGACCCGTGATACGCGATCGCTTATG---TCCGTCCGTCTTCTT 1115154
Query 180150 GAGTTCCTTCATCTCCTTGAACTTGG 180175
||| || || |||||||||||
Sbjct 1115155 GAGCATCTGGTCCTGCTTGAACTTGG 1115180
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434140929720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |