Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq89 165 7e-36 >seq89 Length=907297 Score = 165 bits (182), Expect = 7e-36 Identities = 171/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 30233 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30292 |||||||| || ||||||||||||||||||||||| |||||||||| || ||||||||| Sbjct 229924 TACTCTGCGCCAAAATGCCTCCACTGGAACCCGTAAACCGGTCCCAAATCCCCCTCTTCC 229983 Query 30293 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30352 || ||| | || || |||||||||||| | ||| || || || | ||||| ||||| Sbjct 229984 CTATGCGCCAACCCAACCTTGTCCAAAAATTGTCTCGATCCATTCCCATCCCAAATCTTG 230043 Query 30353 ACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30412 |||||||| || || | | ||| |||| || || || | |||||||| || || ||| Sbjct 230044 ACCCCCTTGTCGGACAACAATTTCGAGTCGGTCGATCCGCGAACGAACCAAAGGAGTTCC 230103 Query 30413 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 || | || | | | ||||||| |||||||||| | ||||| Sbjct 230104 TCGATGATGCCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGG 230147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309721588604