Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014955.1_202016-12- 23] 137 sequences; 28,906,851 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq89 167 2e-36 >seq89 Length=907297 Score = 167 bits (184), Expect = 2e-36 Identities = 200/269 (74%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 27457 TGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG---TACTCTGCTCCGAAA 27513 ||||| |||||| |||| || || | ||| || |||| |||||||| || ||| Sbjct 229882 TGATCGACCCCCTCCCCCTGATAATC-ATCCT--TGGCCGTCCTATACTCTGCGCCAAAA 229938 Query 27514 TGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 27573 |||||||| ||||||||||| |||||||||| || ||||||||||| ||| | || || Sbjct 229939 TGCCTCCACTGGAACCCGTAAACCGGTCCCAAATCCCCCTCTTCCCTATGCGCCAACCCA 229998 Query 27574 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 27633 |||||||||||| | ||| || || || | ||||| ||||| |||||||| ||||| Sbjct 229999 ACCTTGTCCAAAAATTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTGTCGGAC 230058 Query 27634 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 27693 | | ||| |||| || || || | |||||||| || || ||||| | || | | | Sbjct 230059 AACAATTTCGAGTCGGTCGATCCGCGAACGAACCAAAGGAGTTCCTCGATGATGCCTCGC 230118 Query 27694 CAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||||||| |||||||||| | ||||| Sbjct 230119 GTAAAGACCTTCTTGGTCGTCAAAAGGGG 230147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506583038447