Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq74 89.7 1e-12
>seq74
Length=1285146
Score = 89.7 bits (98), Expect = 1e-12
Identities = 382/595 (64%), Gaps = 14/595 (2%)
Strand=Plus/Plus
Query 281585 CCAACCGGTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATA 281644
||| || ||||| |||||| |||||||| |||||| | ||||| || || | ||
Sbjct 1089832 CCATCCCGTTCCGATACCATCCGAACCATTAACCAAAGCCATGGGGATGATGGGGATGTA 1089891
Query 281645 ACATTCTGGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCTGT 281704
|| || || || || | |||||| || | | || | ||| | ||| ||||| |
Sbjct 1089892 CCAAGACGGCTCGATGTTTTGACCATCGTCGTTGAGGTATTCCAGCACGTTGTCATCAGC 1089951
Query 281705 ATCGACGAAA-ACCTGTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCG 281763
|| |||| || |||||| | | | ||||||||||| || | || |
Sbjct 1089952 GG-GATGAAAGACGCTTCGCGTGATGGATGATACGTTCGTGAAGATGTAACGAGCCGAAG 1090010
Query 281764 CGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGG--CAACAACCAGTT 281821
| |||||||||||| ||||| | || || || ||||| | ||| | | || |||
Sbjct 1090011 CCGCGTCTTTACCACCTTGCAGACGCGTACCGAATTGACCGTTCGGGTCGAGAA--TGTT 1090068
Query 281822 AATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATAC 281881
| ||| ||| ||||||| | | || |||| | | ||| || || || | |
Sbjct 1090069 GAGGTTGTTGGACCCGACGAACTGTTGCGCCAAGCCAATGATGGTGCCTTGCAAACTCAA 1090128
Query 281882 CTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTTCAC 281941
|||||||| || || || ||| || || || ||||| | | ||| | ||||| |
Sbjct 1090129 ATCACCGTGATGGTACGCCGAGTGCTCAGCGACGTAACCGCCCAGTTGTCCGACCTTGAT 1090188
Query 281942 GTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---TATAATACTTTTCGTTGAGAAGGCTT 281998
|| ||||| ||||| ||||| |||| | || || || |||||| || ||
Sbjct 1090189 CTCCTGCGTCAACTTGCGCTTGAA---GCAACCGAACAAGACCTTGCGTTGACCCGGTTT 1090245
Query 281999 GAAACCATCAACGACAGACGGAATGCTGCGTTCCAGGTCATACCGCGAGAACAAAATAAG 282058
||| ||||||| |||||| ||||| || | ||| | ||||| | || |
Sbjct 1090246 GAATCCATCAATGACAGAGGGAATCGAACGCACGTTGTCGGCCATTGAGAAGAGGATCAA 1090305
Query 282059 TTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCGGGCTTCTTGTGGTCAAGTTGGTTTC 282117
||||||| ||||| | | || |||| || |||| | ||||||| || | | |
Sbjct 1090306 CTCCTTGTTGATGAAATCCTCGATCGGG-ACTTCGGCGATGCTGTGGTCGAGGTACGTGC 1090364
Query 282118 CCGGCTCGTATGCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTTGAA 282172
| || || | | || |||||||||||| | |||||| ||||||||||
Sbjct 1090365 CGGGGACGAAGCCTCGCAGCCACTCCTTGCGGTTGTCGGCCTTCTTCTTGTTGAA 1090419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057822224508530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |