Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq82 93.3 3e-14
>seq82
Length=918051
Score = 93.3 bits (102), Expect = 3e-14
Identities = 224/337 (66%), Gaps = 4/337 (1%)
Strand=Plus/Plus
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
|||||||||| || | ||||| ||||| || ||||| || ||| | | | | |
Sbjct 229785 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTCTCCTTGATATTCTTGACAACC 229844
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044
|| | ||||| || || || || || | |||||| || || | |||| ||||
Sbjct 229845 TGCATCAATTGATCGACCCCCTCCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCTG 229902
Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104
| || |||||||||||||| || || || || ||||| | ||| || || || || |
Sbjct 229903 CGCCAAAATGCCTCCACTGGAACCCGTAAACCGGTCCCAAATCCCCCTCTTCCCTATGCG 229962
Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164
|| |||| || || |||||| ||| ||||||||| |||||||||| | || ||
Sbjct 229963 CCAACCCAACCTTGTCCAAAAATTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCT 230022
Query 102165 CTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224
| || | | ||| ||| || ||||| | | ||||| | ||||| || | |
Sbjct 230023 TGTCGGACAACAATTTCGAGTCGGTCGATCCGCGAACGAACCAAAGGAGTTCCTCGATGA 230082
Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261
|||| | ||| || |||| || || ||||| ||
Sbjct 230083 TGCCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGG 230119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361250623239881
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |