Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq82 96.9 2e-15 >seq82 Length=918051 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 |||||||||| || | || || |||||||| ||||| | || | || | | | Sbjct 229785 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTCTCCTTGATATTCTTGACAACC 229844 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAA--GACCTTGATATTCTG 97408 ||| | |||||||| || || || || ||||| | ||| | ||| ||| |||| Sbjct 229845 TGCATCAATTGATCGACCCCCTCCCCCTGATAATCATCCTTGGCCGTCCT--ATACTCTG 229902 Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468 | |||||||||||||| ||||| || ||||| ||||| | || || ||||| |||| Sbjct 229903 CGCCAAAATGCCTCCACTGGAACCCGTAAACCGGTCCCAAATCCCCCTCTTCCCTATGCG 229962 Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 || |||| ||| || ||| | || |||||||| |||||||||| Sbjct 229963 CCAACCCAACCTTGTCCAAAAATTGTCTCGATCCATTCCCATCCCAAAT 230011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783446337670