Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq79 158 3e-33
seq70 89.7 1e-12
>seq79
Length=1733205
Score = 158 bits (174), Expect = 3e-33
Identities = 479/734 (65%), Gaps = 17/734 (2%)
Strand=Plus/Plus
Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817
||||| || |||||| ||| ||| || |||| || ||||| | ||||| |
Sbjct 50237 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTCGGC 50296
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||| ||||| ||| || || | || || || ||||||
Sbjct 50297 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 50356
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
||| ||||| ||||||||| | ||||| || || ||||| || ||| | |||
Sbjct 50357 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 50416
Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997
|| ||| |||| | || |||||| | ||| || |||| | || || ||| |
Sbjct 50417 ATCGAGCGCGTCTTGCAGTCGTACAACTTCATGTCCGAGCGCTACTTCACCCACGCCTCG 50476
Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG- 249055
|||||||||||||||||||| || | || || ||||| ||||| || | | || |
Sbjct 50477 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCT---CTCGTCCTGTTTCCTGGT 50532
Query 249056 --CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAA 249110
| ||| | ||||| || | || ||||| || ||||| || | ||||| |||
Sbjct 50533 CACGATGAAGGACGATTCGATTGAAGGCATCTACGACACACTCA---AGACGTGCGCGCT 50589
Query 249111 GATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTC 249170
|| || || ||| || || |||||| | | || ||||||||| |||| || ||
Sbjct 50590 CATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTC 50649
Query 249171 GTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGA 249230
|||||| || || ||||| | | || ||||| ||| | || || || |
Sbjct 50650 CTACATCGCCGGCACGAATGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAA 50709
Query 249231 GTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTA 249287
|||||| | | | || |||| | || | || || | ||||| || ||
Sbjct 50710 CAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTA 50769
Query 249288 TTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAA 249347
| || |||||||||||| | || |||||||||||| | |||||| |||||||
Sbjct 50770 CCTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAA 50829
Query 249348 CGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCG 249407
||| | | || ||||| ||||||| | || ||| | |||| | ||||||
Sbjct 50830 GGAGGAAGTCCGCGCTCGTGATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGA 50889
Query 249408 CCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCAT 249467
|| ||| |||||| |||||| ||| | || | | || |||| ||||| | ||||
Sbjct 50890 GCGTGTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCA 50949
Query 249468 CGATCTACACGGCG 249481
||| | ||||||
Sbjct 50950 CGAAGTCTACGGCG 50963
>seq70
Length=1260279
Score = 89.7 bits (98), Expect = 1e-12
Identities = 121/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 115388 TCGAAAACCTTAATATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGT 115447
|||| |||| || || || |||| ||||||||||| |||||||| ||| || | ||
Sbjct 845457 TCGAGTACCTCAAGATGGCGCATCGACTCTGAATCGGCTCGATGATCTTGTTGCTCTGGT 845516
Query 115448 TGCAGACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCT 115507
|||| | | | ||| || || ||| | ||| | | ||||| ||| ||| ||||| |
Sbjct 845517 TGCACGCAAAGGCGAAGCGAGTGGTGTTGGAGAAGATTTCCATCGTCCTTCGGAGCGCTT 845576
Query 115508 GGAAAGCACCAGGTGTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556
| || || || ||||||||||| || |||||||| | ||| | |||
Sbjct 845577 GTTGGGCTCCCGGGGTCATCGAGTCGGCTTCGTCGAGGATGACGAGCTT 845625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073764597750208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |