Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq79 158 3e-33 seq70 89.7 1e-12 >seq79 Length=1733205 Score = 158 bits (174), Expect = 3e-33 Identities = 479/734 (65%), Gaps = 17/734 (2%) Strand=Plus/Plus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| || ||||| | ||||| | Sbjct 50237 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTCGGC 50296 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| ||||| ||| || || | || || || |||||| Sbjct 50297 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 50356 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| ||||||||| | ||||| || || ||||| || ||| | ||| Sbjct 50357 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 50416 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || |||||| | ||| || |||| | || || ||| | Sbjct 50417 ATCGAGCGCGTCTTGCAGTCGTACAACTTCATGTCCGAGCGCTACTTCACCCACGCCTCG 50476 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG- 249055 |||||||||||||||||||| || | || || ||||| ||||| || | | || | Sbjct 50477 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCT---CTCGTCCTGTTTCCTGGT 50532 Query 249056 --CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAA 249110 | ||| | ||||| || | || ||||| || ||||| || | ||||| ||| Sbjct 50533 CACGATGAAGGACGATTCGATTGAAGGCATCTACGACACACTCA---AGACGTGCGCGCT 50589 Query 249111 GATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTC 249170 || || || ||| || || |||||| | | || ||||||||| |||| || || Sbjct 50590 CATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTC 50649 Query 249171 GTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGA 249230 |||||| || || ||||| | | || ||||| ||| | || || || | Sbjct 50650 CTACATCGCCGGCACGAATGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAA 50709 Query 249231 GTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTA 249287 |||||| | | | || |||| | || | || || | ||||| || || Sbjct 50710 CAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTA 50769 Query 249288 TTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAA 249347 | || |||||||||||| | || |||||||||||| | |||||| ||||||| Sbjct 50770 CCTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAA 50829 Query 249348 CGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCG 249407 ||| | | || ||||| ||||||| | || ||| | |||| | |||||| Sbjct 50830 GGAGGAAGTCCGCGCTCGTGATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGA 50889 Query 249408 CCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCAT 249467 || ||| |||||| |||||| ||| | || | | || |||| ||||| | |||| Sbjct 50890 GCGTGTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCA 50949 Query 249468 CGATCTACACGGCG 249481 ||| | |||||| Sbjct 50950 CGAAGTCTACGGCG 50963 >seq70 Length=1260279 Score = 89.7 bits (98), Expect = 1e-12 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 115388 TCGAAAACCTTAATATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGT 115447 |||| |||| || || || |||| ||||||||||| |||||||| ||| || | || Sbjct 845457 TCGAGTACCTCAAGATGGCGCATCGACTCTGAATCGGCTCGATGATCTTGTTGCTCTGGT 845516 Query 115448 TGCAGACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCT 115507 |||| | | | ||| || || ||| | ||| | | ||||| ||| ||| ||||| | Sbjct 845517 TGCACGCAAAGGCGAAGCGAGTGGTGTTGGAGAAGATTTCCATCGTCCTTCGGAGCGCTT 845576 Query 115508 GGAAAGCACCAGGTGTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 | || || || ||||||||||| || |||||||| | ||| | ||| Sbjct 845577 GTTGGGCTCCCGGGGTCATCGAGTCGGCTTCGTCGAGGATGACGAGCTT 845625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764597750208