Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq79 111 2e-19 >seq79 Length=1733205 Score = 111 bits (122), Expect = 2e-19 Identities = 416/646 (64%), Gaps = 10/646 (2%) Strand=Plus/Minus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| || ||| | ||| || || | ||| |||||||| |||||||| ||||| | || Sbjct 50914 CCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAGCAAAGAA 50855 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | | |||||| || || ||||| ||| || |||||| | | Sbjct 50854 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 50795 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | || | |||||||| || | ||| || || | |||| || || ||||| || || Sbjct 50794 GACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 50735 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 || || | ||| | |||||||| || || || | | ||| || | || ||||| || Sbjct 50734 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGA 50675 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 ||||| || |||| ||| ||| || | || || || || || | ||| Sbjct 50674 GTAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACC 50615 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTGTCATAGATGCCTT 63606 || || || || | || ||||| | ||||| ||| || | ||||| |||||||||| Sbjct 50614 GATACCACCGGCGGTCTTGGAGATGAGCGCGCA-CGTCTTGAGTGTGTCGTAGATGCCTT 50556 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666 | || ||| || |||| | | || |||||| || | || | ||| |||| Sbjct 50555 CAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTC 50496 Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726 | || || || | || || || ||||| || || | || || | | ||||||| Sbjct 50495 CGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAAGTTGTACG 50436 Query 63727 TCT-CAATAGCTGAGTCTATATCCCATTGA---TGAATTCCTACTGCGACACGCATTAAC 63782 || ||| | | || || || ||| || || || || ||||||||||| | | Sbjct 50435 ACTGCAAGA-CGCGCTCGATGTC---GTGACCGTGGATGCCGACGGCGACACGCATGAGC 50380 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 |||||||| || | ||| | | ||| || || | ||||||||| || | Sbjct 50379 ATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGC 50320 Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63888 || || || ||||| |||||||| || || || ||||| |||| Sbjct 50319 GTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAA 50274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816568673680