Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq79 105 1e-17
seq82 87.8 3e-12
>seq79
Length=1733205
Score = 105 bits (116), Expect = 1e-17
Identities = 134/181 (74%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096
||||||||||| ||||||||| | || ||||| | |||||| || | |||||| ||
Sbjct 52114 ATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACCATTATCGATCTGTCCGCCGACCGA 52173
Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156
|||| || |||||||||| |||||| |||| | || ||| ||||||| | | |
Sbjct 52174 GGTGCCTTCATTGACCAGTCGCAATCGCTCAACATCCAC-TTGTCGAGCCCGAC-AATGG 52231
Query 98157 CGTA--TGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACT 98214
|| | | || ||||| ||||| |||| ||||| || || ||||||||||||||||
Sbjct 52232 CGCAGCTCACGTCGATGCACTTCTACGGTTGGAAGCGAGGACTGAAGACGGGCATGTACT 52291
Query 98215 A 98215
|
Sbjct 52292 A 52292
Score = 100 bits (110), Expect = 4e-16
Identities = 323/496 (65%), Gaps = 4/496 (1%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
|| || ||||| || || || || || | || ||||| | || || |||||||| |||
Sbjct 50732 CAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCCGAC 50791
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || | || | ||||| ||| ||| || || | || || | ||
Sbjct 50792 GTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGAT 50851
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
| || | ||| |||||| | || ||| | |||||| |||| ||| | | || ||| ||
Sbjct 50852 CTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGGCGAC 50911
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
||| ||| | ||||||| | | ||||| || ||| || ||||||||||||
Sbjct 50912 TGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTACGGCGAAGAGTTT 50971
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGAGTCGATGCACG 97174
| | || | | ||||| | |||||||| | | |||||| || || |
Sbjct 50972 CGCGTCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA-TCCCCGCGCA 51030
Query 97175 AGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTA 97234
| | || ||| | || || | || ||||| || || || | |||| ||| |||||
Sbjct 51031 AAAGCTTTGGTATGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTA 51090
Query 97235 CAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
|||||| | | || | || | | |||||| || | ||||| |||||| || |
Sbjct 51091 CAAGGACGCTG-CAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCGA 51149
Query 97294 ATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGG 97353
| || ||||| ||||| | |||||| | | ||||||||| || |||||| |||
Sbjct 51150 ACCTTTGCACTGAAATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTTTGCAACTTGG 51209
Query 97354 CATCGGTCAATCTGCC 97369
| ||| || | ||||
Sbjct 51210 CCTCGATCGCTTTGCC 51225
>seq82
Length=918051
Score = 87.8 bits (96), Expect = 3e-12
Identities = 238/356 (67%), Gaps = 14/356 (4%)
Strand=Plus/Minus
Query 69893 CTACCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGG 69952
|| || || ||||||||||||| |||||| ||| |||||||||| ||| | |||
Sbjct 230122 CTCCCCCTTTTGACGACCAAGAAGGTCTTTACGCGAGGCATCATCGAGGAACTCCTTTGG 230063
Query 69953 ATGATTTCCGGATCGACCAATGCCAAAGAGCTGAGCCGA-AAGGGTGTACACATTTGGAG 70011
| || |||||||||| | | ||| | || |||| ||||| || | ||||||
Sbjct 230062 TTCGTTCGCGGATCGACCGACTCGAAATTGTTGT-CCGACAAGGGGGTCAAGATTTGGGA 230004
Query 70012 CGGCAACAGTAGTCGAAGCG--TTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGC 70069
|| || | |||| | ||||||| | | || || | | || |||||||
Sbjct 230003 TGGGAATGGA--TCGAGACAATTTTTGGACAAGGTTGGGTTGGCGCATAGGGAAGAGGGG 229946
Query 70070 GATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTG- 70128
||| |||| || || ||||| |||||||||||||| | ||| | ||||| ||| |
Sbjct 229945 GATTTGGGACCGGTTTACGGGTTCCAGTGGAGGCATTTTGGCGCAGAGTAT-AGGACGGC 229887
Query 70129 CGAGACAGACTATTCGGGTCAGGGTGTTGATCAAT---TGCAGACAATCATTGACACTCT 70185
| || || ||| ||| |||| || ||||||| ||||| ||| | | | |
Sbjct 229886 CAAGGATGATTATCAGGGGGAGGGGGTCGATCAATTGATGCAGGTTGTCA---AGAATAT 229830
Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATT 70241
|||| || || || |||||||||||| | || | | ||||| || |||| ||
Sbjct 229829 CAAGGAGAACCCCACCGATAGGAGGATCATCTTGAGTGCTTGGAACCCGGCAGGTT 229774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057986515560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |