Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq79 224 3e-53 >seq79 Length=1733205 Score = 224 bits (248), Expect = 3e-53 Identities = 605/911 (66%), Gaps = 12/911 (1%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 |||||| | ||| |||||| | ||| ||| | || | | | |||||||||||| Sbjct 50315 AAGACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAGGTCGCCGAACGCCCGCAG 50374 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGA-TTGA 363518 || ||| | |||||||| || | || ||||| | | || | || |||| ||| Sbjct 50375 CACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAG--CGCGTCTTGC 50432 Query 363519 AA-CATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAACAATGTACAA 363575 | | || || |||| | || | | | || ||||| |||||| |||| || | | ||| Sbjct 50433 AGTCGTACAA-CTTC-ATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTCAA 50490 Query 363576 TGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTC 363635 || ||||| | | | || ||| | || || || || || | | |||||||||||||| Sbjct 50491 CGCCGGAACGCCTCACCCGCAGCTCTCGTCCTGTTTCCTGGTCACGATGAAGGACGATTC 50550 Query 363636 CATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGG 363695 || || || |||| |||||||| |||| || || || || ||||||| || || || Sbjct 50551 GATTGAAGGCATCTACGACACACTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGG 50610 Query 363696 AATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGG 363754 || ||| | |||||||| | || || || | | ||||| |||||| | Sbjct 50611 TATCGGTTTGAGCATCCACAACATCCGCGCGACCGG-CTCCTACATCGCCGGCACGAATG 50669 Query 363755 GATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCG 363814 | |||||||| || | || |||||||| ||||| | |||| || ||| | ||||||| Sbjct 50670 GCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCG 50729 Query 363815 ACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCG 363874 |||| ||||| ||||| || || || || || || |||||||| || |||| Sbjct 50730 ACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCCG 50789 Query 363875 ATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTG 363934 | | || ||||| || || || || || ||| || || |||||| | || || |||| Sbjct 50790 ACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTG 50849 Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA 363994 |||| |||| ||| || ||| || | || | || ||| |||| || ||||| | Sbjct 50850 ATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGGCG 50909 Query 363995 ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACT 364054 | ||| | ||||| ||||| |||| || || || ||| || | || || || | Sbjct 50910 ACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTACGGCGAAGAGT 50969 Query 364055 ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCAC 364114 | | | | ||| || || ||| |||||| || ||||| || ||||| | Sbjct 50970 TTCGCGTCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGCGC 51029 Query 364115 AGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGT 364174 | ||||| |||| ||| || | || | ||| | || || || | || | ||| | | Sbjct 51030 AAAAGCTTTGGTATGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCT 51089 Query 364175 ACAAAGATTCGTGC-AACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC 364233 |||| || | ||| ||| || || ||||| || ||||||| || || || | Sbjct 51090 ACAAGGACGC-TGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCG 51148 Query 364234 AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTT 364293 ||||| || || || || || || ||| | || || |||||| ||||| || ||| | Sbjct 51149 AACCTTTGCACTGAAATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTTTGCAACTTG 51208 Query 364294 GCGTCGATCGC 364304 || |||||||| Sbjct 51209 GCCTCGATCGC 51219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351412402442