Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq70 122 7e-23 seq85 113 4e-20 seq74 113 4e-20 >seq70 Length=1260279 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || ||| |||| || || || || | | Sbjct 438406 ATGCAAATCTTTGTCAAGACGCTCACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCA 438347 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||||||||||||||| ||||| || || ||| Sbjct 438346 GACACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAA 438287 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||||| ||||| ||||| ||||||| |||||| Sbjct 438286 CAGCGTCTCATCTTTGCGGGCAAGCAGTTGGAGGACGGTCGCACGCTCTCCGACTACAAC 438227 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 438226 ATTCAGAAGGAGTCGAC 438210 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | ||||| || ||| | || || || || || | | Sbjct 438178 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATTACGCTCGAGGTCGAGTCGTCA 438119 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||||||||||||||| ||||| || || ||| Sbjct 438118 GACACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAA 438059 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||| | ||||| ||||| |||||||||||||| Sbjct 438058 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACGCTCTCCGATTACAAC 437999 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || || || | ||||| || Sbjct 437998 ATTCAGAAGGAGTCGACGCTTCATTTGGT 437970 Score = 111 bits (122), Expect = 1e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||||||||| || || ||||| || || || ||| |||| || || || || || Sbjct 680307 AGATGCAAATTTTCGTCAAGACTTTGACAGGCAAGACGATCACGCTCGAGGTCGAGTCCT 680248 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| | |||| || || || ||||||||||| ||||| ||||| | Sbjct 680247 CGGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACC 680188 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || | || || || || || ||| | ||||| ||||| ||||||| |||| Sbjct 680187 AGCAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACA 680128 Query 22397 ACATTCAAAAAGAATCCAC 22415 ||||||| || ||||| || Sbjct 680127 ACATTCAGAAGGAATCGAC 680109 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | ||||| || ||| |||| || || || || || | Sbjct 679849 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 679790 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| ||||| ||||| || Sbjct 679789 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 679730 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || || ||| | ||||| ||||| ||||||| |||||| Sbjct 679729 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 679670 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| || ||||| || | || || || |||| Sbjct 679669 ATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCG 679635 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | ||||| || ||| |||| || || || || || | Sbjct 680077 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 680018 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| ||||| ||||| || Sbjct 680017 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 679958 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || || ||| | ||||| ||||| ||||||| |||||| Sbjct 679957 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 679898 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || ||||| || Sbjct 679897 ATTCAGAAGGAATCGAC 679881 Score = 102 bits (112), Expect = 7e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 |||||||||| || |||||||| | || || || ||| |||| || || || || | Sbjct 438636 AGATGCAAATCTTCGTTAAAACGCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCAT 438577 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| | |||| || ||||||||||||||||| ||||| || || | Sbjct 438576 CAGACACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACC 438517 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || | || || || ||||| ||| | ||||| |||||| || | ||||||| Sbjct 438516 AGCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCGGATTACA 438457 Query 22397 ACATTCAAAAAGAATCCAC 22415 |||| || || || || || Sbjct 438456 ACATCCAGAAGGAGTCGAC 438438 >seq85 Length=620530 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280 |||||| || || || ||| | || || || ||| |||| || || || || | |||| Sbjct 150976 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 151035 Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340 || | ||| | |||| || || ||||||||||| || || || || || || || Sbjct 151036 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 151095 Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400 |||||| || ||||||||||| ||| | |||||| |||||| || | || |||||||| Sbjct 151096 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACAT 151155 Query 22401 TCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || ||| | || || || Sbjct 151156 CCAAAAGGAGTCGACCCTCCACTTGGT 151182 >seq74 Length=1285146 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279 ||||||| || || || || | || || || || |||| || || || || | ||| Sbjct 284502 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 284561 Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339 | || | ||| | |||| || || ||||||||||| || || || ||||| || | Sbjct 284562 ACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCCGACCAGC 284621 Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399 ||||||| || ||||||||||| ||| | |||||| |||||| || | || ||||||| Sbjct 284622 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACA 284681 Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 | ||||| || || ||| | || || || | || | ||||| ||| Sbjct 284682 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTCCGCGGTGGT 284728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727329878015