Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq70 122 7e-23
seq85 113 4e-20
seq74 113 4e-20
>seq70
Length=1260279
Score = 122 bits (134), Expect = 7e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | || || || ||| |||| || || || || | |
Sbjct 438406 ATGCAAATCTTTGTCAAGACGCTCACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCA 438347
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || ||||||||||||||||| ||||| || || |||
Sbjct 438346 GACACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAA 438287
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| ||||| ||||| ||||| ||||| ||||||| ||||||
Sbjct 438286 CAGCGTCTCATCTTTGCGGGCAAGCAGTTGGAGGACGGTCGCACGCTCTCCGACTACAAC 438227
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || || || ||
Sbjct 438226 ATTCAGAAGGAGTCGAC 438210
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | ||||| || ||| | || || || || || | |
Sbjct 438178 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATTACGCTCGAGGTCGAGTCGTCA 438119
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || ||||||||||||||||| ||||| || || |||
Sbjct 438118 GACACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAA 438059
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || ||||| ||| | ||||| ||||| ||||||||||||||
Sbjct 438058 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACGCTCTCCGATTACAAC 437999
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| || || || || | ||||| ||
Sbjct 437998 ATTCAGAAGGAGTCGACGCTTCATTTGGT 437970
Score = 111 bits (122), Expect = 1e-19
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||||||||| || || ||||| || || || ||| |||| || || || || ||
Sbjct 680307 AGATGCAAATTTTCGTCAAGACTTTGACAGGCAAGACGATCACGCTCGAGGTCGAGTCCT 680248
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| | |||| || || || ||||||||||| ||||| ||||| |
Sbjct 680247 CGGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACC 680188
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || || | || || || || || ||| | ||||| ||||| ||||||| ||||
Sbjct 680187 AGCAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACA 680128
Query 22397 ACATTCAAAAAGAATCCAC 22415
||||||| || ||||| ||
Sbjct 680127 ACATTCAGAAGGAATCGAC 680109
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | ||||| || ||| |||| || || || || || |
Sbjct 679849 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 679790
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || || ||||||||||| ||||| ||||| ||
Sbjct 679789 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 679730
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || || ||| | ||||| ||||| ||||||| ||||||
Sbjct 679729 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 679670
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
||||| || ||||| || | || || || ||||
Sbjct 679669 ATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCG 679635
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | ||||| || ||| |||| || || || || || |
Sbjct 680077 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 680018
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || || ||||||||||| ||||| ||||| ||
Sbjct 680017 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 679958
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || || ||| | ||||| ||||| ||||||| ||||||
Sbjct 679957 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 679898
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || ||||| ||
Sbjct 679897 ATTCAGAAGGAATCGAC 679881
Score = 102 bits (112), Expect = 7e-17
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| || |||||||| | || || || ||| |||| || || || || |
Sbjct 438636 AGATGCAAATCTTCGTTAAAACGCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCAT 438577
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| | |||| || ||||||||||||||||| ||||| || || |
Sbjct 438576 CAGACACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACC 438517
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || || | || || || ||||| ||| | ||||| |||||| || | |||||||
Sbjct 438516 AGCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCGGATTACA 438457
Query 22397 ACATTCAAAAAGAATCCAC 22415
|||| || || || || ||
Sbjct 438456 ACATCCAGAAGGAGTCGAC 438438
>seq85
Length=620530
Score = 113 bits (124), Expect = 4e-20
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280
|||||| || || || ||| | || || || ||| |||| || || || || | ||||
Sbjct 150976 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 151035
Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340
|| | ||| | |||| || || ||||||||||| || || || || || || ||
Sbjct 151036 CACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 151095
Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400
|||||| || ||||||||||| ||| | |||||| |||||| || | || ||||||||
Sbjct 151096 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACAT 151155
Query 22401 TCAAAAAGAATCCACCATACATTTAGT 22427
||||| || || ||| | || || ||
Sbjct 151156 CCAAAAGGAGTCGACCCTCCACTTGGT 151182
>seq74
Length=1285146
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279
||||||| || || || || | || || || || |||| || || || || | |||
Sbjct 284502 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 284561
Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339
| || | ||| | |||| || || ||||||||||| || || || ||||| || |
Sbjct 284562 ACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCCGACCAGC 284621
Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399
||||||| || ||||||||||| ||| | |||||| |||||| || | || |||||||
Sbjct 284622 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACA 284681
Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| ||||| || || ||| | || || || | || | ||||| |||
Sbjct 284682 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTCCGCGGTGGT 284728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727329878015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |