Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq79 370 2e-97 seq82 136 7e-27 >seq79 Length=1733205 Score = 370 bits (410), Expect = 2e-97 Identities = 872/1297 (67%), Gaps = 36/1297 (3%) Strand=Plus/Minus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 |||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| | Sbjct 51489 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCGGGT 51430 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || || ||| |||||| ||||||| || || ||||| ||||||||| Sbjct 51429 GAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCG 51370 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||| || ||||||| | || ||| |||||||| ||||| |||| Sbjct 51369 ATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGGTAGTAGTTGACGTCA 51310 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630 || | ||| | |||| | || | |||||| ||| |||| || |||||| Sbjct 51309 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAGCTTCTTGAAGTCG 51250 Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690 ||| || | | || || ||| ||| || || | ||| |||| Sbjct 51249 TACACGCCG---TTCT------TGATGAAGCTCGGCAAAGCGAT-----CGA----GGCC 51208 Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750 | |||||| ||||| ||| |||| | ||||| || || || ||||| ||||| Sbjct 51207 AAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCAGTGCAAAGGTTC 51148 Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTT-GCAGGCGTCCTTGTA 244809 ||||||| ||||| |||| || || || || || ||| |||| |||||||||| Sbjct 51147 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCAG-CGTCCTTGTA 51089 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCC 244868 ||||||||| || ||||| |||| |||||| |||| | ||| | ||| || | Sbjct 51088 GAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCA-TACCAAAGCTTTT 51030 Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928 || || |||| | || |||||| ||||| | ||| | | | Sbjct 51029 GCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGACGCGAA 50970 Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988 |||| ||| |||| |||| ||||||||| || ||||| | ||| ||| | Sbjct 50969 ACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGT 50910 Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048 ||||| || ||| ||| | || ||||||||| ||||| |||||||| || |||||| | Sbjct 50909 CGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGAT 50850 Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108 | | | | || ||| ||| |||||| | || |||| || || ||||||| Sbjct 50849 CACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGT 50790 Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168 || ||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || |||| Sbjct 50789 CGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGT 50730 Query 245169 CCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGC 245228 | || | | || |||| ||| || || | || || |||||||| |||| || Sbjct 50729 CGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGC 50670 Query 245229 CGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTC 245288 | || ||||| |||||||| ||| | | | || |||| |||| || || | | Sbjct 50669 CATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATAC 50610 Query 245289 CGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGC 245348 | |||||| |||||||||||| ||||| |||||| ||||| ||||| || || Sbjct 50609 CACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAGATGCCTTCAATCG 50550 Query 245349 TGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGT 245408 || |||||| ||| ||| || ||||| || ||||| || | || | | | || Sbjct 50549 AATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTCCGGCGT 50490 Query 245409 TGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGG 245467 |||| || || || ||||||||| ||||||| |||| || | ||| ||||| ||| Sbjct 50489 TGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGC-GCTCGGACATGAAGTTGTACGACTGC 50431 Query 245468 AGCAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCT 245525 | ||| ||| ||||||| || |||||||| | |||| | |||||| |||||| Sbjct 50430 A--AGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCT 50373 Query 245526 G-GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCT 245582 | |||||| ||| | | || | ||| | |||| |||||||||||||||||||| Sbjct 50372 GCGGGCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTCT 50316 Query 245583 TGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCT 245642 |||| |||||||| |||||| || ||| || || | ||||| || ||| | | Sbjct 50315 TGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGT 50256 Query 245643 CGGCG-TGCTTCTGACTGACCTCGTAAAACTTTTGCG 245678 ||||| || ||| |||||||||| || ||||| Sbjct 50255 CGGCGTTGGCCATGA-TGACCTCGTACGTCTCTTGCG 50220 >seq82 Length=918051 Score = 136 bits (150), Expect = 7e-27 Identities = 188/260 (72%), Gaps = 5/260 (2%) Strand=Plus/Minus Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803 ||| | || || |||||||||||||||||| || | | |||||||||| | |||||| Sbjct 77365 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 77306 Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 || ||||| |||||| | |||||||| || || | |||||||| |||||| ||||| Sbjct 77305 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTCTTGTTC 77246 Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922 || ||||||| || ||| |||| || ||| | |||||||| |||||| Sbjct 77245 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATCAAGGAGGC 77190 Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAA 42982 ||| |||||||||||||| ||| | || || | || ||| || |||||||||| Sbjct 77189 CGTCGAGATCGAGAAGGAATTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCATGAA 77130 Query 42983 CCACGACCTCATGTGCAAGT 43002 | | ||||||||| ||| Sbjct 77129 TGCCAAGCTCATGTGCCAGT 77110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337653644560