Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq79 370 2e-97
seq82 136 7e-27
>seq79
Length=1733205
Score = 370 bits (410), Expect = 2e-97
Identities = 872/1297 (67%), Gaps = 36/1297 (3%)
Strand=Plus/Minus
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| |
Sbjct 51489 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCGGGT 51430
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||| || || ||| |||||| ||||||| || || ||||| |||||||||
Sbjct 51429 GAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCG 51370
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||| || ||||||| | || ||| |||||||| ||||| ||||
Sbjct 51369 ATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGGTAGTAGTTGACGTCA 51310
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | ||| | |||| | || | |||||| ||| |||| || ||||||
Sbjct 51309 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAGCTTCTTGAAGTCG 51250
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
||| || | | || || ||| ||| || || | ||| ||||
Sbjct 51249 TACACGCCG---TTCT------TGATGAAGCTCGGCAAAGCGAT-----CGA----GGCC 51208
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| |||||| ||||| ||| |||| | ||||| || || || ||||| |||||
Sbjct 51207 AAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCAGTGCAAAGGTTC 51148
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTT-GCAGGCGTCCTTGTA 244809
||||||| ||||| |||| || || || || || ||| |||| ||||||||||
Sbjct 51147 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCAG-CGTCCTTGTA 51089
Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCC 244868
||||||||| || ||||| |||| |||||| |||| | ||| | ||| || |
Sbjct 51088 GAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCA-TACCAAAGCTTTT 51030
Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928
|| || |||| | || |||||| ||||| | ||| | | |
Sbjct 51029 GCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGACGCGAA 50970
Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988
|||| ||| |||| |||| ||||||||| || ||||| | ||| ||| |
Sbjct 50969 ACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGT 50910
Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048
||||| || ||| ||| | || ||||||||| ||||| |||||||| || |||||| |
Sbjct 50909 CGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGAT 50850
Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108
| | | | || ||| ||| |||||| | || |||| || || |||||||
Sbjct 50849 CACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGT 50790
Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168
|| ||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || ||||
Sbjct 50789 CGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGT 50730
Query 245169 CCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGC 245228
| || | | || |||| ||| || || | || || |||||||| |||| ||
Sbjct 50729 CGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGC 50670
Query 245229 CGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTC 245288
| || ||||| |||||||| ||| | | | || |||| |||| || || | |
Sbjct 50669 CATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATAC 50610
Query 245289 CGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGC 245348
| |||||| |||||||||||| ||||| |||||| ||||| ||||| || ||
Sbjct 50609 CACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAGATGCCTTCAATCG 50550
Query 245349 TGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGT 245408
|| |||||| ||| ||| || ||||| || ||||| || | || | | | ||
Sbjct 50549 AATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTCCGGCGT 50490
Query 245409 TGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGG 245467
|||| || || || ||||||||| ||||||| |||| || | ||| ||||| |||
Sbjct 50489 TGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGC-GCTCGGACATGAAGTTGTACGACTGC 50431
Query 245468 AGCAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCT 245525
| ||| ||| ||||||| || |||||||| | |||| | |||||| ||||||
Sbjct 50430 A--AGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCT 50373
Query 245526 G-GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCT 245582
| |||||| ||| | | || | ||| | |||| ||||||||||||||||||||
Sbjct 50372 GCGGGCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTCT 50316
Query 245583 TGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCT 245642
|||| |||||||| |||||| || ||| || || | ||||| || ||| | |
Sbjct 50315 TGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGT 50256
Query 245643 CGGCG-TGCTTCTGACTGACCTCGTAAAACTTTTGCG 245678
||||| || ||| |||||||||| || |||||
Sbjct 50255 CGGCGTTGGCCATGA-TGACCTCGTACGTCTCTTGCG 50220
>seq82
Length=918051
Score = 136 bits (150), Expect = 7e-27
Identities = 188/260 (72%), Gaps = 5/260 (2%)
Strand=Plus/Minus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | || || |||||||||||||||||| || | | |||||||||| | ||||||
Sbjct 77365 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 77306
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| |||||| | |||||||| || || | |||||||| |||||| |||||
Sbjct 77305 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTCTTGTTC 77246
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922
|| ||||||| || ||| |||| || ||| | |||||||| ||||||
Sbjct 77245 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATCAAGGAGGC 77190
Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAA 42982
||| |||||||||||||| ||| | || || | || ||| || ||||||||||
Sbjct 77189 CGTCGAGATCGAGAAGGAATTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCATGAA 77130
Query 42983 CCACGACCTCATGTGCAAGT 43002
| | ||||||||| |||
Sbjct 77129 TGCCAAGCTCATGTGCCAGT 77110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337653644560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |