Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq79 201 1e-46
seq74 131 2e-25
seq76 125 9e-24
seq82 89.7 6e-13
>seq79
Length=1733205
Score = 201 bits (222), Expect = 1e-46
Identities = 559/848 (66%), Gaps = 11/848 (1%)
Strand=Plus/Minus
Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529
||||| || |||| || || || | | ||| ||| | | |||||| || |||||
Sbjct 51219 GCGATCGAGGCCAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCA 51160
Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589
|| || | || || ||| || ||||| | ||||||||| || || ||| ||||
Sbjct 51159 GTGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA 51100
Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649
|| |||||||| |||||| | || | || || || |||| | |||||| || | |
Sbjct 51099 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATAC 51040
Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708
|| | | | ||| | || | || ||||| || ||||||| ||||| || | |
Sbjct 51039 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 50981
Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768
| | | ||||||||| || | | || ||| || || || | | ||||||||
Sbjct 50980 CAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 50921
Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828
||| | ||| | || | |||| ||||||| ||||||||| || || |||||||||||
Sbjct 50920 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAGC 50861
Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888
|||||||||| ||| ||| |||| || | || || || || | |||| ||
Sbjct 50860 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 50801
Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945
|| | || || ||||||||||| || ||||| | ||||| | || |||
Sbjct 50800 CTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 50741
Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005
||| | |||| || || | ||| ||| || | || || ||||| || | ||| ||
Sbjct 50740 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCC 50681
Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063
| || | |||||| || || ||| || ||| | | || | || | ||||||
Sbjct 50680 GTTCGAGTAGCCATTCGTGCCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 50623
Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123
|| ||| ||||| || || ||| ||||| |||||||| | |||| || |||||
Sbjct 50622 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAG 50563
Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183
|| || || ||||| || |||| | | || ||||| ||| ||| | || ||
Sbjct 50562 ATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGA 50503
Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243
|| || || ||||||||||| || || | |||||| |||| | | ||||||
Sbjct 50502 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAAG 50443
Query 115244 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302
| ||| | || ||||||| || | ||||| | ||||| || |||| | ||| |||||
Sbjct 50442 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACACGCAT 50384
Query 115303 AAACATGT 115310
| |||||
Sbjct 50383 GAGCATGT 50376
>seq74
Length=1285146
Score = 131 bits (144), Expect = 2e-25
Identities = 340/506 (67%), Gaps = 23/506 (5%)
Strand=Plus/Plus
Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581
||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||||
Sbjct 1090628 CCCTTGGTTGCCTTGACGATGGGGGTGATGAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 1090686
Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641
| || || | |||| | || | || | ||| |||||||||||||| || |||||
Sbjct 1090687 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTAATGTGCGATCCATC 1090746
Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701
|| |||| ||| | ||| ||||| ||| || || || ||| | || || ||
Sbjct 1090747 GTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCAGTGTA 1090806
Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761
| |||||||| || ||||||||||||| ||||| | ||||| ||| || | |||
Sbjct 1090807 GACTTTACCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 1090862
Query 172762 -GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACA 172817
||| | ||| | | || || || || || |||| || || | ||||| |
Sbjct 1090863 CGAGGAGGGCCTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAGGGGAAGA 1090922
Query 172818 CACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 172877
|||| |||| || ||||| || |||| ||||| | || ||||| | ||| |||||||
Sbjct 1090923 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGACACGGCGAGCGCCTTGGCGGAAT 1090982
Query 172878 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 172935
| || || |||| ||||||||| ||||| || | | | ||| || || | ||||||
Sbjct 1090983 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTGGTTCGC 1091040
Query 172936 ATCGTCCAACTTGGGAATACCAGTAATTTTGGA---CTTGCGGGCACCATCTGTCTTCTT 172992
||| || | |||| || ||| || || || ||| | || || ||||||||
Sbjct 1091041 ATCCTCGAGCTTGACAAGACCCGTGATACGCGATCGCTTATGT---CCGTCCGTCTTCTT 1091097
Query 172993 GAGTTCCTTCATCTCCTTGAACTTGG 173018
||| || || |||||||||||
Sbjct 1091098 GAGCATCTGGTCCTGCTTGAACTTGG 1091123
>seq76
Length=1206387
Score = 125 bits (138), Expect = 9e-24
Identities = 279/411 (68%), Gaps = 6/411 (1%)
Strand=Plus/Plus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| ||||| || |||| ||| ||| ||| || || ||| |||||||| ||| |
Sbjct 68861 TACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAATCCGAGACG 68920
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGT 8644
|| |||||||| || || || || || ||| | ||| | | ||| | || ||||
Sbjct 68921 ACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGGTTTCT-GGATCGT 68979
Query 8645 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGA 8704
||||| ||||| || || || | | | | || ||| |||||| | |||||||||||
Sbjct 68980 CAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTCAACCACGA 69039
Query 8705 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGATGGTATCAAACAAA 8763
||| || |||||||| | ||||| || | ||||||| | ||| | | || | |
Sbjct 69040 GTCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAGATCTCGCGA-GCTGTCGCCGAGA 69098
Query 8764 TCGTCGC-GGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGG 8822
|| |||| ||| | ||| | | | | | || ||| | | ||| || | || |||
Sbjct 69099 TC-TCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGTGATTGG 69157
Query 8823 GGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGAC 8882
|||||||| ||||| || || | ||||||| | | || || ||||| | |||
Sbjct 69158 GGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACACCCCCGAC 69217
Query 8883 GAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933
|| | |||| |||||||||| ||||| ||| |||||| || ||||| |||
Sbjct 69218 GACTTTGTCCTCGCGACGGGTGAGACCCACCCCGTCAAAGAATTCGTCGAG 69268
>seq82
Length=918051
Score = 89.7 bits (98), Expect = 6e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| || || || |||||||| ||| || || || || ||||||| ||| |
Sbjct 275534 TACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 275475
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645
|| |||||||| || || || ||| || ||| | ||| | || ||| ||||
Sbjct 275474 ACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 275415
Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705
||||| ||||| || || || | | | |||||| ||||||||||||||||||||||
Sbjct 275414 AAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATTCTCTTCAACCACGAG 275355
Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 8744
|| ||||| ||||||| ||||| || | ||||||
Sbjct 275354 TCCCCCCGCCGTGGCCGCACCTTCGTCACGAGAAAGATC 275316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352621833480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |