Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq79 288 1e-72 >seq79 Length=1733205 Score = 288 bits (318), Expect = 1e-72 Identities = 742/1124 (66%), Gaps = 25/1124 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || || ||| || ||| | || || || |||| | Sbjct 50297 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 50356 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| ||||| |||||| |||| || ||||| |||||| Sbjct 50357 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 50416 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---ACCATGGCC 93894 || | || |||| | | | || |||| || | | || ||| ||| Sbjct 50417 ATCGAGCGCGTCTTGCAGTCGTACAACTTCATGTCCGA---GCGCTACTTCACCCACGCC 50473 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || || ||||||||| | Sbjct 50474 TCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTCTCGTCCTGTTTCCTGGTC 50533 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| ||| || || || || | ||||| |||||| || ||| |||| Sbjct 50534 ACGATGAAGGACGATTCGATTGAAGGCATCTACGACACACTCAAGACGTGCGCGCTCATC 50593 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || |||||| Sbjct 50594 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTAC 50653 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| || |||||| ||| |||||| ||||||| |||||||| |||| ||||||| Sbjct 50654 ATCGCCGGCACGAATGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAAC 50713 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 50714 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 50773 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || |||||||||||||| || Sbjct 50774 GAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAG 50833 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| ||||||||| | || || || || ||| | || Sbjct 50834 GAAGTCCGCGCTCGTGATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGAGCGT 50893 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || |||| || || || ||| ||| ||||| || ||| Sbjct 50894 GTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAA 50953 Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 || | || | |||| | | ||||| | |||||| | ||||| |||| Sbjct 50954 GTCTACGGCGAAGAGTTTCG-CGTCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAA 51012 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || || ||||| ||| || ||| | || | ||||| || || || Sbjct 51013 GAAGACGATCCCCGCGCAAAAGCTTTGGTATGCGATTCTCGAAGCCCAGGTCGAAACCGG 51072 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | || | ||| | | ||||||| ||| ||| || || ||||| || |||| || Sbjct 51073 CAACCCGTTCATGCTCTACAAGGACGCTGCAAACAAAAAATCGAACCAAAAGAACCTTGG 51132 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||||||| ||||| || ||||| || || ||||||| | | ||||||||| Sbjct 51133 CACGATCAAGTCGTCGAACCTTTGCACTGAAATCATCGAGTACTCGGCGCCGGACGAGTG 51192 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGT 94672 || || || ||| ||| ||| ||| || | | ||| | | ||| || ||| Sbjct 51193 CGCCGTTTGCAACTTGGCCTCGATCGCTTTGCCGAGCTTCAT-CAAGA-----ACGGCGT 51246 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACC 94732 ||| |||| | ||| | ||| | || || ||| | | || ||| Sbjct 51247 GTACGACTTC-AAGAAGCTGCACGAGGTCGTCAAGGTCG---------TCGCTTTCAACT 51296 Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792 ||||| | | || ||| |||| |||||||||| |||||| ||||||| ||| | Sbjct 51297 TGAACCGCATCATTGACGTCAACTACTACCCCGTCATCGAGGCGCAGAACTCCAACTTCC 51356 Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| |||| |||||| Sbjct 51357 GCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGACGCG 51400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722389890760