Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq79 96.9 6e-15 >seq79 Length=1733205 Score = 96.9 bits (106), Expect = 6e-15 Identities = 341/525 (65%), Gaps = 6/525 (1%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| || || ||| ||||| || | | || |||||||| || | | | | || Sbjct 50890 CTCCATGAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACGAGCGCGGACTTCCTC 50831 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | |||||| || || | | |||||||||||||||||| | Sbjct 50830 CTTGCCGTGGTTCTTGCGAAGGTCCAGG-AACTCGAAGACGTCGGCGTGCCACGGCTCGA 50772 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 50771 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 50712 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||| | || || ||||| || || | ||||| | | || ||||||| | |||| Sbjct 50711 TGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCATTCGTGCCGGCGATGT 50652 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| |||| | || || || || | ||||| || Sbjct 50651 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGA 50592 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||||| ||||| || ||| |||||||||| | || ||||||||| || || Sbjct 50591 TGAGCGCGCACGTCTTG-AGTGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTG 50533 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 ||||| | || || | |||| || || || || |||| ||||||||| || Sbjct 50532 ACCAGGAAACAGGACGAGAGCTGCGGGTGAG-GCGTTCCGGCGTTGAAGAGCGTCGGCGA 50474 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATC 205641 ||||||| ||||| |||| || | |||| | || || |||| ||| | || Sbjct 50473 GGCGTGGGTGAAGTAGCGCTCGGACATGAAGTTGTACGACTGCAAGACGCGCTCGATGTC 50414 Query 205642 GAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 | ||||| || || | ||||| | ||||| | ||| || || Sbjct 50413 GTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGG 50369 Score = 89.7 bits (98), Expect = 8e-13 Identities = 160/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || ||||||| || || ||||| ||| || | | || |||||||||| Sbjct 52341 CTGGTCGACGGTGAACTTGATCGCACCGACGGC-GGCGCGCGTGCGCAAGTAGTACATGC 52283 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC-GTTG 203956 | ||||| || || || ||| ||||| | |||||| || | || | || || | Sbjct 52282 CCGTCTTCAGTCCTCGCTTCCAACCGTAGAAGTGCATCGACGTGAGCTGCGCCATTGTCG 52223 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 || ||| | | ||| ||||| || || || ||||| ||||| ||| || || || || Sbjct 52222 GGCTCGACAA-GTGGATGTTGAGCGATTGCGACTGGTCAATGAA-GGCACCTCGGTCGGC 52165 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 || || || |||||||||||| ||||| | |||||| || |||||| Sbjct 52164 GGACAGATCGATAATGGTCTTTTGCGAGAGCTCCCAGACGGTCTTG 52119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153897933360